| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3685 |
|---|
| Symbol | |
|---|
| ID | 4686073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3922034 |
|---|
| End bp | 3924268 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639836703 |
|---|
| Product | pyruvate carboxyltransferase |
|---|
| Protein accession | YP_983902 |
|---|
| Protein GI | 121606573 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases
[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTCC GCGCTGTTGA CAGCGCCGCA CCATTCCTGC CCGCAAGGAA CGCCGTTCCG
TCCAGCCCCA TTGAAAGGCC ATTGCCCACC ATGTATTCAC CCGAGATATT GATCAGCGAA
GTCGGCCCGC GCGACGGCCT GCAATCGGTC AAGGCATGCA TGCCGACGGC CGACAAGCTG
CGCTGGATCG ACGCGCTGTA TGCCGCCGGC GTGCGCGAGA TCGAAGTCGC CTCCTTCGTG
CCGGCCCGGC TGCTGCCGCA GATGGCCGAC GCCGCCGAAG TGGTGCGCCA CGCCATCACG
CTGCCCGGCT TGAGAGTGAT GGCGCTGGTG CCCAACCGCC GGGGTGCCGA GGCGGCGCTG
GCCGCCGGCG TGCACAAGCT CACCGTGCCG GTGTCGGCCA GCGCCGCGCA TTCGCTGGCC
AACGTGCGCA GGACGCGCGA GGAAATGGTC GAGGAAGTGC GCGCCATCGC CGCCCTGCGC
CGCGACCTCG CGCCCCACGT CGGGCTGGAG GCCGGCATTT CGACCGCCTT CGGCTGCACG
CTGCAGGGCC TGGTCGCCGA GGACGACGTG ATCCGGCTGG CCGCGCAATG CATTGCCGCC
GGGGCCGACG AATCCGGCCT GTCGGACACC GTCGGCTATG CCAATCCGGC GCAGGTGCGC
CGCCTGTTCA GGCGCCTGCG CGCCGAAATC GGCCGCCACG CCGGCGCGGC CCACATGCAC
AACACGCGCG GCCTGGGCCT GGCCAACTGC CTGGCGGCCT ACGAGGAAGG CGTTCGCACC
TTCGACGCGT CGCTCGGCGG GCTGGGCGGC TGCCCCTATG CGCCGGGCGC GTCGGGCAAC
GTCGTCACCG AAGACCTGGT GTTCATGTTC GAGGCGATGG GGCTGCGCAC CGGCATCGAC
CTCGAAAAGC TCATCGCCGC GCGCGCTCCC TTGAAGGCCG GGCTGCCGGG CGAGCCGCTG
TACGGATTGA CGCCCGAGGC GGGTTTGCCC AAGGGCTTTG TCCAGGGCGC CCGCATGGCG
GCGCCGGCCA GTCCGGCCGT TGAAGAAAGC GACACCCGAG AAACGCCCCT GCCCTACGCC
GGCATCCGCG TCGTCGAATT CACCCACATG GTGATGGGGC CGACCTGCGG CCTGCTGCTG
GGCGACCTGG GCGCCGAGGT GATCAAGGTC GAGCCGCCCG AGGGCGACGG CACGCGCCGC
CTGCTGGGCT CGGGCGCCGG GTTTTTCCCG GCCTTCAACC GCAACAAGAA AAGCATCGCG
CTCGACCTGA AGACGCCCGA AGGCCGGGAA GCGGCGCTGC GCCTGATCGC CACGGCCGAC
ATCGTCAGCG AGAACTTCAA GCCCGGCACC ATGAAGAAGC TGGGTCTGGA CTACGAAACG
CTCAAGCAGC GCCACCCGCG CCTGGTCTAT GTCAGCCACA AGGGTTTCCT GCCCGGGCCT
TACGAGCACC GCACCGCACT TGACGAGGTG GTGCAGATGA TGGGCGGCCT GGCCTACATG
ACGGGCCGCA GCGGCGACCC GCTGCGCGCG GGCGCCAGCG TGAACGACAT CATGGGCGGC
ATGTTCGGCG CCATCGGCGC GATGGCCGCG CTGCGCCAGC GCGAACTGAC CGGGCGCGGC
ATGGAGGTGC AGTCGGCGCT GTTCGAGAAC AATGTGTTTC TGGTCGGCCA GCACATGATG
CAGTTCGCCG CCACGGCCCA GGCCGCCGCG CCCATGCCCA GCCGCATTTC GGCCTGGGGC
GTGTACGACG TGTTCACCGT CAAGGGCGGC GAGCAGATCT TCCTGGCCGC CGTCAGCGAC
AAGCAATGGG CGGTGTTCTG CCAGGCCTTC GGACTGGGCG AGCTGCTGGC CGACCCGCGC
CTGACCACCA ACAACGACCG CGTGCGGGCG CGCGAATGGC TGCTGCCGAT CCTGCGCTCG
CACCTGGCCG GCTACAGCGC GGCCGAACTC GGCGCGGTGT TTGAAGCCCG CGAACTGCCG
TTCGCGCCCA TCGTGCGGCC CGAGGAACTG TTCGACGACC CGCACCTGAA TGCCACCGGC
GGCCTGGCAC CCGTGCGCAT GAACGACGGC AGCCGCTCCA GGGTGCCGCT GATGCCCTTC
ACGCTGGGCG GCCGGCGGCC CGGCATCCGG CTGCAGCCGC CGCTGCTGGG CGAGCACAGC
CGCGAGTTGC TGCAGGAGCT GGGCTATGGC GAAGACGCCA TCGAGGCTTT CCAGAGCGCC
CGGGTCAACC GTTGA
|
|---|
| Protein sequence | MEVRAVDSAA PFLPARNAVP SSPIERPLPT MYSPEILISE VGPRDGLQSV KACMPTADKL
RWIDALYAAG VREIEVASFV PARLLPQMAD AAEVVRHAIT LPGLRVMALV PNRRGAEAAL
AAGVHKLTVP VSASAAHSLA NVRRTREEMV EEVRAIAALR RDLAPHVGLE AGISTAFGCT
LQGLVAEDDV IRLAAQCIAA GADESGLSDT VGYANPAQVR RLFRRLRAEI GRHAGAAHMH
NTRGLGLANC LAAYEEGVRT FDASLGGLGG CPYAPGASGN VVTEDLVFMF EAMGLRTGID
LEKLIAARAP LKAGLPGEPL YGLTPEAGLP KGFVQGARMA APASPAVEES DTRETPLPYA
GIRVVEFTHM VMGPTCGLLL GDLGAEVIKV EPPEGDGTRR LLGSGAGFFP AFNRNKKSIA
LDLKTPEGRE AALRLIATAD IVSENFKPGT MKKLGLDYET LKQRHPRLVY VSHKGFLPGP
YEHRTALDEV VQMMGGLAYM TGRSGDPLRA GASVNDIMGG MFGAIGAMAA LRQRELTGRG
MEVQSALFEN NVFLVGQHMM QFAATAQAAA PMPSRISAWG VYDVFTVKGG EQIFLAAVSD
KQWAVFCQAF GLGELLADPR LTTNNDRVRA REWLLPILRS HLAGYSAAEL GAVFEARELP
FAPIVRPEEL FDDPHLNATG GLAPVRMNDG SRSRVPLMPF TLGGRRPGIR LQPPLLGEHS
RELLQELGYG EDAIEAFQSA RVNR
|
|---|
| |