| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3657 |
|---|
| Symbol | |
|---|
| ID | 4687806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3891980 |
|---|
| End bp | 3892651 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639836675 |
|---|
| Product | ketopantoate reductase ApbA/PanE |
|---|
| Protein accession | YP_983874 |
|---|
| Protein GI | 121606545 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.7671 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTTCAAG CGCCCGCCAG GGTGTCGGAC ACCGCCGCCG AGCTGAGCCG GCAGGACCTG
GTGATCGTCG CGCTCAAGGG GCCGGTGCTG CCACAACTCG CGGGCTGTGT GGTGCATGCC
AGCGCCAGCC GGGGCGCGCC CGGCATTGTG AATCACGTCA TGGGCCAGGG CCTGATCCTC
GGCGAGGCGG CAGGCGGCGA ATCGGCCCGG GCCACGCGCG TAGGCGCGCT GCTCAGCGGC
GCGGGCTTTG ATGTCACCGT GTCACCGAAT GTGCGCTACG ACATCTGGTT CAAGCTCTGG
GGCAACCTGA CCATGAACCC GGTGTCGGCC ATCACCGGCG CCACCATCGA CCGCCTGCTG
GCCGACCCGC TGGTGCGCGA GTTCTGTTCC AGCGCCATGC GCGAGGCCGC CGCCATTGGC
CGGCACATCG GTTGCGACAT CACGCAAGAC CCCGAGGACC GCCACGCGGT CACGGCCAGG
CTGGGGGCGT TTAAAACCTC CATGCTGCAG GACGCTGAAG CCGGGCGCGA CATCGAACTC
GACAGCATCG TCACCGCGGT GCACGAGATG GGCCAGCGCC TGAACGTGCC CACCCCCCAT
ATCAATGCGC TGCTGGGACT GGCGCGGCTG TTTGGCCGGA CTCATCACCG CTACCCCGAG
GCGCAGCCAT GA
|
|---|
| Protein sequence | MLQAPARVSD TAAELSRQDL VIVALKGPVL PQLAGCVVHA SASRGAPGIV NHVMGQGLIL
GEAAGGESAR ATRVGALLSG AGFDVTVSPN VRYDIWFKLW GNLTMNPVSA ITGATIDRLL
ADPLVREFCS SAMREAAAIG RHIGCDITQD PEDRHAVTAR LGAFKTSMLQ DAEAGRDIEL
DSIVTAVHEM GQRLNVPTPH INALLGLARL FGRTHHRYPE AQP
|
|---|
| |