Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3611 |
Symbol | |
ID | 4689735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3841496 |
End bp | 3842824 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639836624 |
Product | hypothetical protein |
Protein accession | YP_983828 |
Protein GI | 121606499 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.426846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTTT CCAAACTCGT CGTTGCCGCA GCCGTGGTCG CCGCTGGCGC AGCGTCGCTG TCCACCAGCG CCTTCGCGCA GGCCAAGGAG CAGTTCTTCC CGCTGCTGTC CTACCGCACC GGCCCCTACG CGCCCAACGG CACGCCCTGG GCCAACGGCA AGCAGGACTA CATCAAGATG GTCAATGCGC GCGATGGCGG CGTCAACGGC GTCAAGCTGA CGTTTGAAGA ATGCGAAACC GGCTACGCCA CCGACCGGGG CGTCGAATGC TACGAACGCC TGAAGAACAA GCCCGGCGTG GCGCTGATTG ACCCGCAGGC GACCGGCATC ACCTTTGCGC TGACCGAAAA GGTGCCCGTG GACAAGATCC CGCTGATCAC GCTGGGCTAC GGCCTGTCGG TGGCGCAGGA CGGCATGGCC TTCAAGTGGA ACTTCCCGCT GATGGGCAGC TACTGGACCG GCGCCGATAT CCTGGTGCAG CACATCGGCA AGAGCGCCGG CGGCCTGGAC AAGCTCAAGG GCAAGAAAAT CGCGCTGGTC TATCACGACA GCCCGTTTGG CAAGGAGCCG ATTCCGCTGC TGCAGGAGCG CGCCCGCATG CACGGCTTCG AGCTGCAGCT GCTGCCGGTC ACGGCGCCCG GCGTCGAGCA GAAAGCCACC TGGCTGCAGG TGCGCCAGAG CCGGCCTGAC TACGTGATGC TGTGGGGCTG GGGCGTGATG AACTCCACCG CCCTGAAGGA AGCGCAGGCC ACCGGCTTTC CGCGCGACAA GCTCTACGGC GTGTGGTGGG CCGGCGCCGA GCCGGACGTG CGCGACGTCG GCGACGGCGC CAAGGGCTAC CAGGCGCTGG CGCTCAACGG CTCGGGCACC GAGTCCAAGG TCATCCAGGA CATCCTCAAG AACGTGCATG ACAAGGGCCA GGGCACGGGT GCCAAGGACG AAGTGGGCTC GGTGCTGTAC ACGCGCGGCG TGATCATCCA GATGCTCAGC ATCGAGGCCG TGCGCCGCGC GCAGGAGCGC TTTGGCAAGG GCAAGGTCAT GACCGGCGAG CAGGTGCGCT GGGGCATGGA AAACCTGTCG CTCGACCAGA AAAAGCTCGA CGCGCTGGGC TTTGCCGGTG TGATGCGCCC GATCTCGACC AGCTGCGCCG ACCACATGGG CTCGACCTGG GCGCGCGTGC AGACCTGGGA CGGCAAGAAG TGGAAGATGA CCTCCGACTG GTACCAGTCG GATGACCAGA TCATCAAGCC GCTGGTGAAA GCCGGCGCCG ACAAGTACCT GGCCGACAAG AAGCTGACGC GCCGCACGGC AGCCGACTGC CAGTCCTGA
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Protein sequence | MKLSKLVVAA AVVAAGAASL STSAFAQAKE QFFPLLSYRT GPYAPNGTPW ANGKQDYIKM VNARDGGVNG VKLTFEECET GYATDRGVEC YERLKNKPGV ALIDPQATGI TFALTEKVPV DKIPLITLGY GLSVAQDGMA FKWNFPLMGS YWTGADILVQ HIGKSAGGLD KLKGKKIALV YHDSPFGKEP IPLLQERARM HGFELQLLPV TAPGVEQKAT WLQVRQSRPD YVMLWGWGVM NSTALKEAQA TGFPRDKLYG VWWAGAEPDV RDVGDGAKGY QALALNGSGT ESKVIQDILK NVHDKGQGTG AKDEVGSVLY TRGVIIQMLS IEAVRRAQER FGKGKVMTGE QVRWGMENLS LDQKKLDALG FAGVMRPIST SCADHMGSTW ARVQTWDGKK WKMTSDWYQS DDQIIKPLVK AGADKYLADK KLTRRTAADC QS
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