Gene Pnap_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3579 
Symbol 
ID4689267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3802933 
End bp3803523 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content63% 
IMG OID639836592 
ProductYceI family protein 
Protein accessionYP_983796 
Protein GI121606467 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.948947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTT TTTCTTTCAC CCTGCGCGCC GCCAGCCTGG GCCTGGCCGC CGCGCTGCTT 
TCGATGTCGG CCCAGGCCCA GGCCCCAGCC GCGCAAAAGC TGATCCCGGC GCAAAGCGAA
ATTGCCTTTG CCAGCAAGCA GATGGGCGTG TCGGTCGATG GGCATTTCAA GAAGTTCGAT
GCGCAAATCG CGTTTGATCC CGCCAAGCCC GAAGCCAGCA AGATCGCCTT TGCCATCGAC
ACCGGCAGCG CCACAGTCGG CGCGCCCGAG TCCGATGCCG AGCTGCCCAA GCCCGACTGG
TTCAGCGCGG TGAAATTTCC CCAGGCCACC TTCCAGTCAG GCGCCGTCAA GAAAATCGCG
CCGGGCAAAT ACGAAGTGGC CGGCAAGCTG AGCATCAAGG GCAATGTGCG CGATGTCGTG
GTGCCTGTGA CCCTGAGCCA GGCCGGCGCC ATCACCACCG CCAGCGGCGC GTTTGCCATC
AAGCGCCTGG CCTTCAAGAT TGGCGAGAAC GAGTGGGCCG ACACCTCGAT GGTGGCCGAC
GACGTGCAGG TCAAATTCAA GCTCGCGCTG ACCGGCGTGG GCAAATACTG A
 
Protein sequence
MNTFSFTLRA ASLGLAAALL SMSAQAQAPA AQKLIPAQSE IAFASKQMGV SVDGHFKKFD 
AQIAFDPAKP EASKIAFAID TGSATVGAPE SDAELPKPDW FSAVKFPQAT FQSGAVKKIA
PGKYEVAGKL SIKGNVRDVV VPVTLSQAGA ITTASGAFAI KRLAFKIGEN EWADTSMVAD
DVQVKFKLAL TGVGKY