| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3533 |
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| Symbol | |
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| ID | 4688660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3752502 |
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| End bp | 3753269 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639836547 |
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| Product | ABC transporter related |
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| Protein accession | YP_983751 |
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| Protein GI | 121606422 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.815881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGA TCAAAGTTAC CGCGCTCAAC CTGGCCTTTG GGGCCGGCGT GAAAGTGCTC
AACGACGTGA ACCTGCAGAT CGAGGCCGGG CAGTCCTTCG GCCTCGTCGG CGAATCGGGT
TCCGGCAAAA CCACGGTGCT GCGCTGCCTG GCAGGCCAGT ACACCCACTG GCAAGGCGAG
CTGCAGATTG ATGGCAAGGC GCTGGGGCAC AAGCTGGACC GGGCGCGCTG CAAGGACGTG
CAAATGGTTT TCCAGGACCC TTATGGCTCG CTGCATCCCC GGCACACGGT GCATACGGTG
CTGGCCGAGC CCTTGCGCAT CCATGGCATG GCCGACGAGC GCGAGCGCAT CGAATCCATA
CTGACGCGCG TCGGGCTCAA CAGCAGTTTT CGCTTTCGTT ACCCGCACCA GCTCTCGGGT
GGCCAGCGCC AGCGCGTCGC GATTGCACGC GCGCTGATTC TGGAGCCGCG CATTTTGCTG
CTCGATGAAC CGACCTCGGC GCTCGACGTG TCGGTGCAGG CCGAAGTGCT CAACCTGCTG
GCCGAATTGC GCGAACGGGA TGGACTGACC TACCTGCTCG TGACCCACGA CCTGGGCGTG
GTGGCCCACC TGTGCGACCG CCTGGCGGTC ATGCAGCAGG GCCGGATCGT GGAAACGCTG
TCCACCGACG ACCTGTGCAG CAACGCCGCC CAGCACCCCT ACACGCAGAT GCTGGTGGAT
GCCAGCCGTG CCTACAGCCG CGACATGGCG AGCGTGGCTG CGTTGTAG
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| Protein sequence | MSMIKVTALN LAFGAGVKVL NDVNLQIEAG QSFGLVGESG SGKTTVLRCL AGQYTHWQGE
LQIDGKALGH KLDRARCKDV QMVFQDPYGS LHPRHTVHTV LAEPLRIHGM ADERERIESI
LTRVGLNSSF RFRYPHQLSG GQRQRVAIAR ALILEPRILL LDEPTSALDV SVQAEVLNLL
AELRERDGLT YLLVTHDLGV VAHLCDRLAV MQQGRIVETL STDDLCSNAA QHPYTQMLVD
ASRAYSRDMA SVAAL
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