Gene Pnap_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3378 
Symbol 
ID4689457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3579791 
End bp3581686 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content68% 
IMG OID639836392 
Productglucosyltransferase MdoH 
Protein accessionYP_983596 
Protein GI121606267 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2943] Membrane glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC GCCCGTGGCG GGGGTTCTGG AACAGCTTGG GCGCGGCCGC ACTGTGGCCG 
GTGGTGAAAC TGAGCAGCCG GGCAACTCCA AGGCAGGCAT CGGTCCATGC CATGGAGCCG
TGGCAACACG CGGCCAAGCG CCGCCGGACG GTGTTCATGC TGCTGACGCT GGTCAGCACG
GTGCTGGCCA CGGCGCTCTT TGCCGACATG CAGCCCGACT ACGACAATGC CTTTTTGGAA
TACGGCCAGC TGGCCTTGTT CGCCCTGCTG TCGGCCTGGG TCGTGACCGG CTTCATGACG
GCGATGATGG GTTTTTACGT CACGCTGTTC GGCGACGCGC ACACGCTGTC GGCCAAGAAG
GTCCAGCACC ACACGCTGGA CCCGTCCACG CGCACCGCCA TCATCATGCC GATCTGCAAT
GAAGACGTGC GCACCGTGTT CGCCGGCCTG CGCGCCACCT GCGAATCGGT CGCGCTGAGC
GGCCATGTGC GCAATTTCGA CGTGTTCGTG CTGTCCGACA GCAACGACCC GGCCATCATC
CAGGCCGAAC GCGCCGCCTG GGAAGCCCTG CGCGGCCAGC TGGCCAGCAA TATCAACCAG
TCCAGCGACC AGCCGCAGAT CGAGGTCTAT TACCGCCTTC GCAAGCGCCG CACCGACCGC
AAGGCCGGCA ACGTGGCCGA CTTCTGCCGC CGCTGGGGCA AGGACTACCG CTACATGGTG
GTGCTGGACG CCGACAGCGT GATGAGCGGC GACTGCCTGG TCTCGATGGT CAAGCTGATG
GAAGCCAACC CGACCGCCGG CATCATCCAG ACCGCCACCC AGGCCATCGG CCACGTGACG
CTGCATGCGC GCGCGCAGCA GTTCGGCTCG CGCGTGACCG GCCGCCTGTT CACGCTGGGC
ATGCAGTTCT GGCAGATGGG CGAGTCCCAC TACTGGGGCC ACAACGCCAT CATCCGCATC
GAGCCTTTCA TGCAGCATTG CGCGCTGGCG CGCATCTTGG GCACGGGCGG CATGGCCGGC
AGCATCATGT CGCACGATTT CGTCGAAGCC GCGCTGATGC GCCGCGCCGG CTACCACGTC
TGGCTGGTCG CCGACCTGAT CGGCAGCTAC GAGCAGCAGC CGCCCGATTT GCTGGCCGAG
TTGCAGCGCG ACCGCCGCTG GTGCCAGGGC AACCTGCAGA ACTCGCGCCT GATCGCCGAG
CCCGGCATCC ACCCGGTGCA CCGCTCGATG TTTGCCACCG GCGCCATGGC CTACCTGTCG
GCGCCGCTGT GGCTGTGCTT CATGACGATG GGCACGGCGC TGTGGCTGTC GGGTTCGCCG
ATGGTCAGCG ACTGGGCCGT GCTGCCCGGC GAGCTAGTGT CGCTCTGGGC CTGGACGCTG
TGCATGCTGT TTTTGCCGCG CATCCTGGGC ATTGCCGCCA TCCTGCTCAA TCGCCAGCAG
CAGGCCTATG GCGGCACCGC CAGCCTGCTG CGCAGCGCGC TGCTGGAAAC CCTGGTTGCC
CTGCTGCAGG CGCCGATCCG CATGCTGGCG CATTCGCTGT TTGTCGTCGT TGCGCTGACC
GGCCTGAAGC TGGACTGGAA ATCGCCTCCG CGCGAAGCCG CCGCCGTGCC ATGGCGCCAT
GCGCTGGGGC AACTCGCGCC GATGAGCGGC GTGGTCGTGG CGCTGGCCGC CGGCATCGCG
ATGATCGACG CCAGCGCGCT GGTCTGGCTG CTGCCGGTCG GCCTGCCGCT GCTGCTGTCG
ATTCCGATGA CCGTGCTGAC CAGCAAGGTC GGCGTGGGCA CCGCGATGCG CGCGCAGAAC
TACCTGTTGA TCCCGGAAGA AACCCGCTCG CCAGCCGTGC TGCGCCGCGC CTGGCTGCAC
GCCAGCCAGC CCAAGCCGAG GCTCAAAGCG GCCTGA
 
Protein sequence
MAPRPWRGFW NSLGAAALWP VVKLSSRATP RQASVHAMEP WQHAAKRRRT VFMLLTLVST 
VLATALFADM QPDYDNAFLE YGQLALFALL SAWVVTGFMT AMMGFYVTLF GDAHTLSAKK
VQHHTLDPST RTAIIMPICN EDVRTVFAGL RATCESVALS GHVRNFDVFV LSDSNDPAII
QAERAAWEAL RGQLASNINQ SSDQPQIEVY YRLRKRRTDR KAGNVADFCR RWGKDYRYMV
VLDADSVMSG DCLVSMVKLM EANPTAGIIQ TATQAIGHVT LHARAQQFGS RVTGRLFTLG
MQFWQMGESH YWGHNAIIRI EPFMQHCALA RILGTGGMAG SIMSHDFVEA ALMRRAGYHV
WLVADLIGSY EQQPPDLLAE LQRDRRWCQG NLQNSRLIAE PGIHPVHRSM FATGAMAYLS
APLWLCFMTM GTALWLSGSP MVSDWAVLPG ELVSLWAWTL CMLFLPRILG IAAILLNRQQ
QAYGGTASLL RSALLETLVA LLQAPIRMLA HSLFVVVALT GLKLDWKSPP REAAAVPWRH
ALGQLAPMSG VVVALAAGIA MIDASALVWL LPVGLPLLLS IPMTVLTSKV GVGTAMRAQN
YLLIPEETRS PAVLRRAWLH ASQPKPRLKA A