Gene Pnap_3327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3327 
Symbol 
ID4688828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3525416 
End bp3526450 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content67% 
IMG OID639836339 
Producthypothetical protein 
Protein accessionYP_983545 
Protein GI121606216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTCA ACCTGCAACT GACCACCACC GTGTGGCACG CCGCCCTGCC CAAGGGCATC 
AACAAGCTGG TCCTGCTGGC CCTGTGCAAC CACGTCAACG ACGCGACAGG CCTCACCTGG
CCGTCCGTGA CCCGCCTGGC GCGCCTGTGC GGCATGAGCA GCCGTACTGT GCAAACCCAT
ATCCGCGCCC TGCTGCGCGC CGGCATCCTG TGCGTGCGCC GCCTGCGCAC CGGCCACAGC
ACCTGGTACG CGGTCAACCT CAACGGCCTG CCCAGCGCCT TCCCCGAGGG CGACCTGGAC
AGCGGGCCTG TGGATAACTC CGTCGATTCC GATACTTTTG TGGATAACTC GGCTTTGCCC
CCCGCAGAAT CTGCACCCCC CGCTACCGAT TTGGGTACGC CACCCCCGCA AATTCACGTA
CTGACCCCCG CAGAATCTGC ACCCATAACT GGTTTTAACT TTGAAGGGAA CATAAGAAGA
ACTGCCGGCG CACCGGCCTT GCCGGCCACG CTGGTGATGA TCGATGGAGT AAACCCGAAA
GTCCTGGCCG ACTTCGTCGC CATCCGCAAG AAAAAGAAAG CCGGCGCGCT GGACAGCACG
GCGCTTGAAA CGCTGTGCAG CCAGGCGGCG CTGGCCGGCA TGACGCTGGA GCAGGTCCTG
ATCAAATGCC GCGACAAGGG CTGGGCTCGT TTCGAAGCGT CCTGGCTGAC GACTCAGCCG
GCCCCGCACA TCGGCAGCAT CACCACCCCG GCAGCGCCTG CAGGCCCGCC GCCCGCCCGG
CCCAAGCCCG CCGACCCGGC CATCGTGGCG GCTGAACTGC AACGCCAGCG CCTGATCCGC
CAGACACCGC CGCCGGTCAT CGCCGGCATC CAGATCGGCA GCACCGGCCC CAGCTGGGCA
CACCGCATCG TCAACCGGCA CCAGTCCGGC GAGCGCATCA CCCGTGCTGT GCTCCGGGAC
GCCTGCACCG TGCTCAGGCT TGACCCATCA AGCCTGTCCT GCACCCCCGC CACCGCCGCC
GCCCGCATGC ACTGA
 
Protein sequence
MRLNLQLTTT VWHAALPKGI NKLVLLALCN HVNDATGLTW PSVTRLARLC GMSSRTVQTH 
IRALLRAGIL CVRRLRTGHS TWYAVNLNGL PSAFPEGDLD SGPVDNSVDS DTFVDNSALP
PAESAPPATD LGTPPPQIHV LTPAESAPIT GFNFEGNIRR TAGAPALPAT LVMIDGVNPK
VLADFVAIRK KKKAGALDST ALETLCSQAA LAGMTLEQVL IKCRDKGWAR FEASWLTTQP
APHIGSITTP AAPAGPPPAR PKPADPAIVA AELQRQRLIR QTPPPVIAGI QIGSTGPSWA
HRIVNRHQSG ERITRAVLRD ACTVLRLDPS SLSCTPATAA ARMH