| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3280 |
|---|
| Symbol | |
|---|
| ID | 4688165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3482574 |
|---|
| End bp | 3483314 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639836293 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_983499 |
|---|
| Protein GI | 121606170 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCA GCATGTTTCG CCAGCCGGAG GGGCCGCGCT GCATCTATCT GCTGGACGAC
GACCCGGATA TTTGCCGCCT GGTCAGCAGC ACGCTGCGGG AGTTTGGCTT TGAGACTTTT
GAATGCCACA GCGCCATGGA GTTGCGCCGC CTCCTGCTGG CGCGCGTGCC TGACCTGTGC
ATCGTGGACC TGGGCCTGCC TGATGCCGAT GGCATGGACG TGGTGCGTGA GCTGCAGGCG
CGCTACGCCT GCGGCGTGAT GGTGCTGACC GGGCGCGGTT ACCTCAGCGA CCGGGTCATG
GGACTGGAGT TGGGGGCCGA CGACTATGTG GTCAAGCCGT TCGAGCCGCG TGAACTGGTG
GCCCGCGTGC GCAGCATCCT GCGGCGCCGG GACAAGGCAC CCGGCGCGTC GATGCAGCCG
GAAATGCGCT CGCAGCTTGC CGAGTTCGGC GGCTGGCGTT TTCGTGCCGA TTGCAACCTG
CTGTCGTCGC CGGGCGGCCA GGAGTGGACG CTCAGCGCCG GCGAGTCGCG CATGCTGCTG
CAGTTTTTGC AGCGGCCCAA CCGGATTCTT GACCGCGAAC AACTGTGCGG CGACCGCGAT
CTTTCGGCCC TGGACCGCAG TGTCGATGTG CGGGTGTCCA GGCTGCGGCG CAAGCTCGAA
TCAGACCCCC AGCACCCCAC GACCATTCGC ACGGTGTATG GCGCCGGCTA TCTGCTGGCG
GCCGAGGTCA GGTGGCTGTA G
|
|---|
| Protein sequence | MTASMFRQPE GPRCIYLLDD DPDICRLVSS TLREFGFETF ECHSAMELRR LLLARVPDLC
IVDLGLPDAD GMDVVRELQA RYACGVMVLT GRGYLSDRVM GLELGADDYV VKPFEPRELV
ARVRSILRRR DKAPGASMQP EMRSQLAEFG GWRFRADCNL LSSPGGQEWT LSAGESRMLL
QFLQRPNRIL DREQLCGDRD LSALDRSVDV RVSRLRRKLE SDPQHPTTIR TVYGAGYLLA
AEVRWL
|
|---|
| |