| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3244 |
|---|
| Symbol | |
|---|
| ID | 4686252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3446078 |
|---|
| End bp | 3447043 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639836257 |
|---|
| Product | peptidase S1 and S6, chymotrypsin/Hap |
|---|
| Protein accession | YP_983463 |
|---|
| Protein GI | 121606134 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAGGC CTGCCCTTTA CAGTAGCTCC AGCCGTACCG GCCACGCGCT GACTGATTCT
GCGGACGCGT CCCCAACGGC CCCGGCTTCA AGCACATCAG GAAACGGCGC ACCGCCTCCT
CCCAGCCCGG CCAAACCTCC TTCACGCGCC ACGCGCTTCA TGCGCCATGT TGCGGCGCAC
AACATCCGCC TGCTCTGGTC GATGGTCGGA CTGCTGGCCT TGATGCTGGC CATCAGCCTG
TCTTTCTCGC TGCACCCGCC CGGCCACAAG CTGACCCAGA AGGACATCAA CGCAGCGGTG
CTGAAAACCC TGGAAACCAC GGTCCTCCCT TCGCCGGCGG CCAAGGCCTA CGACGCCATC
ATTCCTTCGG TCGTGCGCGT GGTGGGGCTG GGCAAGCCCG TCAAGAGCAA GGATGGCGAC
GAGCATTCGG ACCGCAGCGT CGGCACCGGC GTGGTCATCG TGGACAAGGG CATTATCCTG
ACCAACCTGC ATGTGGTGCA GGGCGCCGAA ACCATCAAGG TCACCTTTTC CGATGGCCTG
GAGTCCACCG CCAGCATCAC CGGCGTGCAG CCGGAAAACG ACCTGGCGGT GCTGCAGGCG
CACAAGATTC CCGACGACAT GATTGCCGCC ACGCTGCGCT CCACCGCCGA CCTGGCGCCC
GGCGACCAGG TGGTGGCGGT GGGCTATCCC TTCGGCATCG GGCCATCGGC TTCCAGCGGC
GTCATCTCGG GGCTGGGGCG CACCTTCCGC TCGCCCGAGG GCAAGCAGCA ACTCACCAAC
CTGATCCAGT TCGATGCGGC CGCCAATCCC GGCAACTCGG GCGGCCCGCT GGTCACCATG
GACGGCGAGG TGATCGGCAT CGTGACGGCC ATCTACAACC CCAACCAGCA GCGCTCCTTT
GTCGGCATCG GTTTTGCCGT GCCGATTGAA AACGCCGCCT CGGCAGCCGG CGTGCCTCCT
TTCTGA
|
|---|
| Protein sequence | MRRPALYSSS SRTGHALTDS ADASPTAPAS STSGNGAPPP PSPAKPPSRA TRFMRHVAAH
NIRLLWSMVG LLALMLAISL SFSLHPPGHK LTQKDINAAV LKTLETTVLP SPAAKAYDAI
IPSVVRVVGL GKPVKSKDGD EHSDRSVGTG VVIVDKGIIL TNLHVVQGAE TIKVTFSDGL
ESTASITGVQ PENDLAVLQA HKIPDDMIAA TLRSTADLAP GDQVVAVGYP FGIGPSASSG
VISGLGRTFR SPEGKQQLTN LIQFDAAANP GNSGGPLVTM DGEVIGIVTA IYNPNQQRSF
VGIGFAVPIE NAASAAGVPP F
|
|---|
| |