Gene Pnap_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3220 
Symbol 
ID4688032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3420872 
End bp3421795 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content65% 
IMG OID639836233 
Producthypothetical protein 
Protein accessionYP_983439 
Protein GI121606110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGA ACCCCACTCC TTCGTTCCTG CCCTTGACAG GTCTTTATGA GCCTTCTGGT 
ATCCAGCAGT TGGCGGACGG GCGTTTTCTG GTGGTTGAGG ATGAGCAGGG CCATGCCTTC
AGCCTGGTCG AGATCAGCGC CAGCGGGCTG GTCAAGAGCA CGCCGCTGGG TCCGGGATGG
TTTGAGTGGG GCAACAAGGA CTTCTGGAAG CTGGAGGACC TGGAAGGGCT CGCCATCGAC
ACAGCCGGCT GCCTCTACGC TGTCACCTCG CATTCGCGCG ACGACGACGG CATGGAAAAG
AAGCCGCGCG ACCGGCTGGT CCAGTTTCGG GTCGATGCCA ACCGCGTGGT CGAGCCCAGG
GTGGCGAAGG GACTGAAGCC TGCGCTGATG GCGGCGCACC CGCTGCTCGC CGCCGCTGCG
CGGATCAAGG ATGTCAAGGC CGGCGGCGGG CTCAACATCG AGGGCCTGGC CATCAGCCCG
GACCAGCAGC GGCTGCTGAT CGGCTTTCGC AGTCCGCTGC GGGACGGTCA TGCCCTGATT
GCCAGCGTTG AAAATCTTTC TGCAGTGTTT GAGGAAGACG CGGCGCCGCA GGTGTCTGGC
ACCCTGCAGA CGCTGGACCT GCAGGGGCAG GGGATTCGCG GCATGTGCCA TATGGCCGCG
CTTGATGGCT ACCTGGTCAT CGGCGGCCCC GTCTCGCGCG AGGGCGAATT CAAGCTCTGG
TTCTGGAGCG GGCAAGCCGG TGCGCCGGCG CGCCGTGTCA CGGTTCCCGG CTTGCAGGGT
TTCGGGAACG CGGAAGGGGT GTGCCCGGCG GTGATTGACG GCGCGCCGAA AATCGTCATC
GTCAGCGATG ACGGCAACCG AAAGGAAGGG CGCTGCGCCC ATTTTCTGCT GCTTGAGCCG
GGGCAGCTGC AGATTGCGCC TTGA
 
Protein sequence
MTQNPTPSFL PLTGLYEPSG IQQLADGRFL VVEDEQGHAF SLVEISASGL VKSTPLGPGW 
FEWGNKDFWK LEDLEGLAID TAGCLYAVTS HSRDDDGMEK KPRDRLVQFR VDANRVVEPR
VAKGLKPALM AAHPLLAAAA RIKDVKAGGG LNIEGLAISP DQQRLLIGFR SPLRDGHALI
ASVENLSAVF EEDAAPQVSG TLQTLDLQGQ GIRGMCHMAA LDGYLVIGGP VSREGEFKLW
FWSGQAGAPA RRVTVPGLQG FGNAEGVCPA VIDGAPKIVI VSDDGNRKEG RCAHFLLLEP
GQLQIAP