| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3189 |
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| Symbol | |
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| ID | 4687717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3386777 |
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| End bp | 3388117 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639836202 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_983408 |
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| Protein GI | 121606079 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.27784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00540344 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGAATA AATTAAAAAA AATAATAACG CACAAAAGCT TTATTAAATA CTTTATTAAT
ACGTCGTGGA TGTTTTTTGA GCAATTTTTT CGTTTATTAG CTGGAGTATT TGTAGGTATC
TATGTCGCTC GATATCTAGG CCCAATGCAA TTTGGAATTT TTAGCTACGC AGGAGCATTT
GTTGCGCTAT TTGCCGCACT TTCCAAATTG GGACTAGATG GCGTAGTCGT TCGAGAGTTA
ATAAATCAAC CTGAGTGCAA GAATAAAATT TTAGGAACTG CATTCTGGTT GAAAGTAACA
GCAAGTCTTG TTGTACTTGG CGTAATAGCG ACAATACTTC CATGGTCGTC AAATGATAAG
CAGACAAATA TATATATATA TATTATAGCT ATGGGTCTGC TATTTCAAAC TTTTGAAATA
GCAGATTTTT ATTTTCAATC AACTACGCAA ATCAAATACG TTTCAATGTG CAGGACAGTG
CAATTGGCGA TATCATCTGC AGTAAAGTTA TATTTAATAT ATATCGAGGC TGATTTAATG
CCTTTTGTAA TCGTCACACT TATCGATCAA ATAATGTTGG CATTGGCATT CATTTTAATG
CTTTACGCCA AAAATAGCAT ATCAATATTT TCATATTTTT CAAAATCAAT CGCAGCTTCC
TTGTTGAAAG ATTCATGGCC CCTTATAGTT TCAAGTCTTG CAATTAGCCT TTACATGCGG
ATAGATCAAA TAATAATTAA AGAATTATTG GGGGTGGCGG ATGTGGGATT GTATTCAGCG
GCACTACGTA TTTCTGAAAC TACATACCTA GTTCCTGTGA TTATATGCAC ATCAATATTT
CCGGCAATTA TCGCAACAAA GAAACTAGGC GATGAAATTT ATTCAAAAAG AATTCTTATT
CTTTTTGAAA GTATGATGCT AGCATCAATA TTGATTGCAA TACCAATATC AATATTTTCT
GATCTGATAA TGAAATCGCT TTTTGGGGAG AAATATATGA TTGCGGGAAG CGTATTGGCA
ATTCACGTTT GGAGTGGCGT TTTTGTCTTT ATGGGCGTGG CCGCAGGTAA ATGGATGTTG
GTGGAGAATA TTACTAAGCA AACAATGTAT CGTACGCTGG CAGGCGCAAT TATTAATATT
TTGTTAAATT TAATTTTAAT ACCGATTTAT GGAATTAAAG GTTCGGCTCT TGCAACATTA
ATAACTTGTT TTACGACATC CATTTTAATG AATTATATAA GTGTAAAAAC CAGAAAATGC
TTTTGGATGC AGATGAGCGC ATTAATTTTT CCTGGCAGAT GTATAATATC AAGCTTTAAA
AAATCTAATC AAAAAATTTA A
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| Protein sequence | MLNKLKKIIT HKSFIKYFIN TSWMFFEQFF RLLAGVFVGI YVARYLGPMQ FGIFSYAGAF
VALFAALSKL GLDGVVVREL INQPECKNKI LGTAFWLKVT ASLVVLGVIA TILPWSSNDK
QTNIYIYIIA MGLLFQTFEI ADFYFQSTTQ IKYVSMCRTV QLAISSAVKL YLIYIEADLM
PFVIVTLIDQ IMLALAFILM LYAKNSISIF SYFSKSIAAS LLKDSWPLIV SSLAISLYMR
IDQIIIKELL GVADVGLYSA ALRISETTYL VPVIICTSIF PAIIATKKLG DEIYSKRILI
LFESMMLASI LIAIPISIFS DLIMKSLFGE KYMIAGSVLA IHVWSGVFVF MGVAAGKWML
VENITKQTMY RTLAGAIINI LLNLILIPIY GIKGSALATL ITCFTTSILM NYISVKTRKC
FWMQMSALIF PGRCIISSFK KSNQKI
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