Gene Pnap_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3016 
Symbol 
ID4687198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3183791 
End bp3184156 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content58% 
IMG OID639836029 
Producthypothetical protein 
Protein accessionYP_983236 
Protein GI121605907 
COG category[S] Function unknown 
COG ID[COG3564] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAAC GAGTAGTCGC CACCGAAGCG TCGCTGGCGC TGATTGAGCG CCTGAAGGCC 
AAACACGGTA CGGCGCTGAT GTTTTTTCAG TCGGCGGGCT GCTGCGACGG CAGTGCGCCC
ATGTGCTACC TCATCGGCGA GCTGTCGGTG GGCCGCTACG ACATCTTGCT GGGAGAGATT
GGCGGCTGCC AGTTCTATAT CAACCAGTCG CATTTTGAAT ACTGGAAGAA TACCCAGCTG
ATCATTGACG TGACCTCGGG CAGCGGCAGC ACTTTTTCGC TCGAAGGGCC GGAAAACGTG
TGTTTCATCA CCCGTTCCCG GCTGTTCAGC GACGAGGAAT GGCGAACACT GCCCCTGCTC
GCCTGA
 
Protein sequence
MVKRVVATEA SLALIERLKA KHGTALMFFQ SAGCCDGSAP MCYLIGELSV GRYDILLGEI 
GGCQFYINQS HFEYWKNTQL IIDVTSGSGS TFSLEGPENV CFITRSRLFS DEEWRTLPLL
A