Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2980 |
Symbol | |
ID | 4686696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3146840 |
End bp | 3147553 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639835993 |
Product | hypothetical protein |
Protein accession | YP_983200 |
Protein GI | 121605871 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.107675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTACA TCCTCGATGC CCTCAAACGC GCCGATGCCG AACGCGAGCG CGGCGCCGTT CCCGGCCTGC AGTCGCGCCA TGCGACGATC CCGGCCGCGC AGGCCGACCC CCGGGCGCGA AACCGCGTCT GGCTGGCCGC CGCAGCGGTG CTGGCGCTGG GCGCCATTGC CGCAGGCCTG TGGTTCTGGC AAACGCCTGC TGGCGGCGTG CGTCTGGCTG CGGTGGAGCC CGCCGTGACC AGCCCCCCCG TGCCCGCGCC GCTGGCACAG CCAGTCCCGA CGCCAGCGCC ACTACCCTCC ATTCCCGCAT CGCCGCCTGC AGTGGCGCCA CGGGCAGCCG CCTCTTCGCC GCCCGCCGTG GCCCGCGCCG CGCCCAAACC CGTGCCAAAG CCGGCGCCGC CAGCGCCTGC CGCTGCCGTG CAAGCGCCGC CCAAACCCAA GCCCGATCCG GTCGCCAAGG CAGCCGCCAC CCAAGCCACC CCGGCCCCCG TCCCGCTGCT CGGCGATCTG CCCGAAGGCC TGCGTCGCGA CATTCCCGCG CTGGCCATCA CCGGCTCGGT TTACTCGGCC AACCCGGCGC AGCGGCTGCT GCTGGTGAAC AACCAGGTGC TGGGCCAGGG CAGCCAGGCC GCGCCCGGCG TGAACCTGGA GGAAATCCAC GCGAAGAGTT CGGTGTTCAG TTTCCGGGGA ACACGGTTTC GGGTGGCGCA TTAA
|
Protein sequence | MSYILDALKR ADAERERGAV PGLQSRHATI PAAQADPRAR NRVWLAAAAV LALGAIAAGL WFWQTPAGGV RLAAVEPAVT SPPVPAPLAQ PVPTPAPLPS IPASPPAVAP RAAASSPPAV ARAAPKPVPK PAPPAPAAAV QAPPKPKPDP VAKAAATQAT PAPVPLLGDL PEGLRRDIPA LAITGSVYSA NPAQRLLLVN NQVLGQGSQA APGVNLEEIH AKSSVFSFRG TRFRVAH
|
| |