Gene Pnap_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2980 
Symbol 
ID4686696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3146840 
End bp3147553 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content73% 
IMG OID639835993 
Producthypothetical protein 
Protein accessionYP_983200 
Protein GI121605871 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.107675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACA TCCTCGATGC CCTCAAACGC GCCGATGCCG AACGCGAGCG CGGCGCCGTT 
CCCGGCCTGC AGTCGCGCCA TGCGACGATC CCGGCCGCGC AGGCCGACCC CCGGGCGCGA
AACCGCGTCT GGCTGGCCGC CGCAGCGGTG CTGGCGCTGG GCGCCATTGC CGCAGGCCTG
TGGTTCTGGC AAACGCCTGC TGGCGGCGTG CGTCTGGCTG CGGTGGAGCC CGCCGTGACC
AGCCCCCCCG TGCCCGCGCC GCTGGCACAG CCAGTCCCGA CGCCAGCGCC ACTACCCTCC
ATTCCCGCAT CGCCGCCTGC AGTGGCGCCA CGGGCAGCCG CCTCTTCGCC GCCCGCCGTG
GCCCGCGCCG CGCCCAAACC CGTGCCAAAG CCGGCGCCGC CAGCGCCTGC CGCTGCCGTG
CAAGCGCCGC CCAAACCCAA GCCCGATCCG GTCGCCAAGG CAGCCGCCAC CCAAGCCACC
CCGGCCCCCG TCCCGCTGCT CGGCGATCTG CCCGAAGGCC TGCGTCGCGA CATTCCCGCG
CTGGCCATCA CCGGCTCGGT TTACTCGGCC AACCCGGCGC AGCGGCTGCT GCTGGTGAAC
AACCAGGTGC TGGGCCAGGG CAGCCAGGCC GCGCCCGGCG TGAACCTGGA GGAAATCCAC
GCGAAGAGTT CGGTGTTCAG TTTCCGGGGA ACACGGTTTC GGGTGGCGCA TTAA
 
Protein sequence
MSYILDALKR ADAERERGAV PGLQSRHATI PAAQADPRAR NRVWLAAAAV LALGAIAAGL 
WFWQTPAGGV RLAAVEPAVT SPPVPAPLAQ PVPTPAPLPS IPASPPAVAP RAAASSPPAV
ARAAPKPVPK PAPPAPAAAV QAPPKPKPDP VAKAAATQAT PAPVPLLGDL PEGLRRDIPA
LAITGSVYSA NPAQRLLLVN NQVLGQGSQA APGVNLEEIH AKSSVFSFRG TRFRVAH