| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2887 |
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| Symbol | |
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| ID | 4686144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3037340 |
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| End bp | 3038632 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639835893 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_983107 |
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| Protein GI | 121605778 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.303028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0961096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGC CCTGCGTTGC CCCTTCTTTT TTGCCCGCCA GATTTGCACG CCATCAGCCG
CTGGTGCTGG CTGCGATCCT TTCATTGTTC CTGGCTGGAT GCGGCAAGGG TGATGCGCCA
GCGGCTCCCG GCGCGGGTGC TGCGCCGCCC CCGCCCCAGG TCGGGGTCGT GACGGTCACG
CCCGGCGACG TGGGCCTGGT CACCGAGTTG CCCGGCCGTC TGGAGGCTTC GCGCATCGCG
CAGGTCAGGG CGCGTGCCGC CGGCATTTTG CAAAAGCGCC TGTTCCGCGA AGGCAGCGAT
GTCAAGGAAG GCCAGGCGCT GTTCACGATT GATTCAGCGC CGTATGCCGC CGCCGCCGCC
AGCGCCAGGG CCGGCCAGGC GCGCGCCGAA GCCAACCTGG CGCAGGCCAC CGCGCTGGCC
GAGCGCTACA AGCCGCTGGT CGAAGCCAAT GCCATCAGCA AGCAGGAATA CGCCAACGCG
GTGGCTGCGC AAAAGCAGGC CGCCGCCGAT GTCGCCGTGG GCAAGGCCAA TGTGCAGACC
GCCAGCATCA CGCTGGGCTA TGCGTCGGTG ACGGCGCCGA TCTCGGGCCG CATCGGCCGC
TCGCTGGTCA CGGAAGGCGC GCTGGTGGGG CAGGGCGACG CCACCCAGCT GGCGGTCATC
CAGCAGATCA ACCCGATGTA TGTGAATTTC ACGCAGTCAG CGTCGGACGT GATGAAACTG
CGCGCTGCCA TGGCCAGCGG CCAGTTCAAG CGGGCCAGCG GCTCGGACGC GGCCAGCGTG
CGCATCGTGC TTGAAGACGG CACCGAATAC GCGCAGCCGG GCCGCCTGCT GTTCTCGGAC
CTGACGGTCG ATGCCACCAC CGGACAGATC ACCTTGCGGG CCGAAGTTCC AAACGCAGGC
GGACAGCTGT TGCCCGGCCT CTATGTGCGG GTGCGGCTCG AACAGGCCCA GGCCACCAAC
GCCATCACCT TGCCGCAGCA GGCGGTCACG CGAACCGCGC AGGGCGACAC CGTCATGGTC
GTGGGCAGCG ATGGCAAGGT CACGTCGCGC ACCATCAAGG TCGGCTCGTC CAAGGGTGCG
CAGTGGGTGG TGCTTGAAGG GCTCAAGGCC GGCGAGCAGG TCATGGTCGA TGGCTTCCAG
AAGCTGCAGA TGATGCCGCC CGGCACGCCG GTCAAGCCCG TGCCATGGCA ACCCGCAGGC
GCGGCGTCGG CGCCCGCAGC AGGCGCTTCT GCGCCGGCGG CCACGGGCAC GGCGCCGGCC
GCTTCTGCCG CAGCCTCGTC CGCAGCGAAG TAA
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| Protein sequence | MPKPCVAPSF LPARFARHQP LVLAAILSLF LAGCGKGDAP AAPGAGAAPP PPQVGVVTVT
PGDVGLVTEL PGRLEASRIA QVRARAAGIL QKRLFREGSD VKEGQALFTI DSAPYAAAAA
SARAGQARAE ANLAQATALA ERYKPLVEAN AISKQEYANA VAAQKQAAAD VAVGKANVQT
ASITLGYASV TAPISGRIGR SLVTEGALVG QGDATQLAVI QQINPMYVNF TQSASDVMKL
RAAMASGQFK RASGSDAASV RIVLEDGTEY AQPGRLLFSD LTVDATTGQI TLRAEVPNAG
GQLLPGLYVR VRLEQAQATN AITLPQQAVT RTAQGDTVMV VGSDGKVTSR TIKVGSSKGA
QWVVLEGLKA GEQVMVDGFQ KLQMMPPGTP VKPVPWQPAG AASAPAAGAS APAATGTAPA
ASAAASSAAK
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