Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2740 |
Symbol | |
ID | 4688472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2885314 |
End bp | 2886009 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639835748 |
Product | two component transcriptional regulator |
Protein accession | YP_982963 |
Protein GI | 121605634 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.307567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0284463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCGCA TCCTTCTGAT CGACGACGAC GCGCAACTCG GCGGGCCGCT GGCGGCCTAC TTTGCGCGCT TTGACATGCA GCTGGTGTGC GCGCTGCGCC CCGGCGCCGG GCTTGAGCTG ATCCGCCAGG GCGGCCTGGA CGCCGCCATC CTGGACGTGA TGCTGCCCGA GATGGACGGC TTTGCGCTGT GCCGCCTGAT CCGCAAGGAA AGCGACATCC CGGTCATCAT GCTCACCGCC CGGGGCGAGG TGATGGACCG GGTCGTCGGG CTGGAGCTGG GCGCCGACGA CTACGTGCCC AAGCCTTTCG AGCCGCGCGA ACTGGTGGCG CGCGTGCAGA CCGTGCTGCG CCGCCGCGTC GCCCCGCCTG CCGCCATCAC CCCGCCGGAT ACCGCCCGCC TGGTGTTCGA TGGCCTGGTG CTGGACCCGG TCACGCGCAC CGTGCAGCGC CAGGGCGAGC TGCTGGAGCT GACCAGCACC GAATTCGACC TGCTGCACCT GCTGGCGCGG GAAGCGGGCA GGGTCTTCAG CCGCGACGAC ATCTTGAGTC GCCTGCGCGG CCACGAGGCC GAGCTGTACA CCCGCGCGGT GGACATCGTG GTCAGCCGCC TGCGCAAGAA GCTCGAACCG CTGGACTGCA TCAAGACCCT GCGCAACGCG GGCTATTCGC TCGCGCTGGG CCGCCGCCCG GCATGA
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Protein sequence | MHRILLIDDD AQLGGPLAAY FARFDMQLVC ALRPGAGLEL IRQGGLDAAI LDVMLPEMDG FALCRLIRKE SDIPVIMLTA RGEVMDRVVG LELGADDYVP KPFEPRELVA RVQTVLRRRV APPAAITPPD TARLVFDGLV LDPVTRTVQR QGELLELTST EFDLLHLLAR EAGRVFSRDD ILSRLRGHEA ELYTRAVDIV VSRLRKKLEP LDCIKTLRNA GYSLALGRRP A
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