| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2647 |
|---|
| Symbol | |
|---|
| ID | 4689225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 2788573 |
|---|
| End bp | 2788872 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639835655 |
|---|
| Product | phage transcriptional regulator, AlpA |
|---|
| Protein accession | YP_982870 |
|---|
| Protein GI | 121605541 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3311] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.561407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGAA AAGAAACTAC CCTAAAAAAG CCCACTGTTC CCGCCATCCC GGCGCTCAAG
GCAACCCTTC CTCAATCGGT TTTCGATGCC ATGCCGGACG GTGGCTACAT CCGTGAGGCC
GGGCTGGTTC CCAGTCCCAA GCGCCCCGGC GTTCCGGTGC CACTGCCTTT TTCAGCCCCG
ACTTTGTGGC GAAAAGTGCG CGAGGGTACC TTTCCTGCGC CGGTCAAGCT GTCCGAGCGT
GTCACCGCCT GGCGCGTAGG CACCATCAGG GCTTGGCTGA CGGCTCAGGC CACGGCGTAA
|
|---|
| Protein sequence | MSRKETTLKK PTVPAIPALK ATLPQSVFDA MPDGGYIREA GLVPSPKRPG VPVPLPFSAP
TLWRKVREGT FPAPVKLSER VTAWRVGTIR AWLTAQATA
|
|---|
| |