Gene Pnap_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2613 
Symbol 
ID4690100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2750719 
End bp2751195 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content62% 
IMG OID639835620 
Producthypothetical protein 
Protein accessionYP_982836 
Protein GI121605507 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.846153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAA TACAACTTAC CCCTGCCCAG CGCAAAGACC ACCGCGCTGA AGCGCACCAT 
CTCAACCCCG TCGTCATGAT TGGCTCCGAC GGCCTCACGG ACGGCGTGAA AAAAGAAATC
GACGCGGCGC TGAACGCCCA CGGCCTCATC AAGGTACGGG TGCAGTCCGA CGACCGGCCC
GGCCGCGAAG AAATGTTCCG CTCCCTGGCC GAAGAACTCG ATGCCGCGCC CATCCAGCAC
ATCGGCAAGC TGCTGGTGTT CTGGCGGCCA ATTCCGGAAA AGGAAAAAAA GGTCAGCGAA
GACCGCATGG CCGGCCCGCG CGATGTCAAG GTGCTGAAAA ACAGCTCGCG CTACGGCCAG
CGGCCCGAAG TCAAGATGCT GCGCGTACTG GGCAACCAGC GCCTGACGCC GGGCGGCACC
GTCAAGCGCG CCAAACCCAG GCAGCAAGTC AGTGTCAAGA AACGCTCGCA AGACTGA
 
Protein sequence
MAQIQLTPAQ RKDHRAEAHH LNPVVMIGSD GLTDGVKKEI DAALNAHGLI KVRVQSDDRP 
GREEMFRSLA EELDAAPIQH IGKLLVFWRP IPEKEKKVSE DRMAGPRDVK VLKNSSRYGQ
RPEVKMLRVL GNQRLTPGGT VKRAKPRQQV SVKKRSQD