Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2613 |
Symbol | |
ID | 4690100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2750719 |
End bp | 2751195 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639835620 |
Product | hypothetical protein |
Protein accession | YP_982836 |
Protein GI | 121605507 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein |
TIGRFAM ID | [TIGR00253] putative RNA-binding protein, YhbY family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.846153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAAA TACAACTTAC CCCTGCCCAG CGCAAAGACC ACCGCGCTGA AGCGCACCAT CTCAACCCCG TCGTCATGAT TGGCTCCGAC GGCCTCACGG ACGGCGTGAA AAAAGAAATC GACGCGGCGC TGAACGCCCA CGGCCTCATC AAGGTACGGG TGCAGTCCGA CGACCGGCCC GGCCGCGAAG AAATGTTCCG CTCCCTGGCC GAAGAACTCG ATGCCGCGCC CATCCAGCAC ATCGGCAAGC TGCTGGTGTT CTGGCGGCCA ATTCCGGAAA AGGAAAAAAA GGTCAGCGAA GACCGCATGG CCGGCCCGCG CGATGTCAAG GTGCTGAAAA ACAGCTCGCG CTACGGCCAG CGGCCCGAAG TCAAGATGCT GCGCGTACTG GGCAACCAGC GCCTGACGCC GGGCGGCACC GTCAAGCGCG CCAAACCCAG GCAGCAAGTC AGTGTCAAGA AACGCTCGCA AGACTGA
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Protein sequence | MAQIQLTPAQ RKDHRAEAHH LNPVVMIGSD GLTDGVKKEI DAALNAHGLI KVRVQSDDRP GREEMFRSLA EELDAAPIQH IGKLLVFWRP IPEKEKKVSE DRMAGPRDVK VLKNSSRYGQ RPEVKMLRVL GNQRLTPGGT VKRAKPRQQV SVKKRSQD
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