Gene Pnap_2501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2501 
Symbol 
ID4688682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2635951 
End bp2636292 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content60% 
IMG OID639835509 
Productconjugal transfer protein TrbC 
Protein accessionYP_982726 
Protein GI121605397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATTTCC AAACAACCAA GCCTATCAAA TCACTCAAAA AGCTGGTCAC GCCCGTCATC 
TCGGGCATGG CCGCACTGGT ATCCCAGGTG GCCCACGCTG GCCCAGCCCT GCCCTGGGAC
GGCCCGATCA CCACGGTGGT CAACAACCTG ACTGGGCCGG TGGCCACCGG CATTTCGACC
GTGGCCTTCC TGGCAGCAGG CGCGGCACTG ATTTTTGGTG GTGACGACTT GGGCGGAATT
GCGAAGAAAC TTTTGTACGT GGTGCTCGGT GTGGCGCTGA TCGTCTTTGG TGCCAACTTC
CTGAGCATGA TCGGTCTGGT CAACAGCGGC GCCTTGATCT GA
 
Protein sequence
MHFQTTKPIK SLKKLVTPVI SGMAALVSQV AHAGPALPWD GPITTVVNNL TGPVATGIST 
VAFLAAGAAL IFGGDDLGGI AKKLLYVVLG VALIVFGANF LSMIGLVNSG ALI