Gene Pnap_2377 details

Gene Information

• Locus tag: Pnap_2377
• ID: 4688629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polaromonas naphthalenivorans CJ2
• Kingdom: Bacteria
• Replicon accession: NC_008781
• Strand: +
• Start bp: 2502203
• End bp: 2505577
• Gene Length: 3375 bp
• Protein Length: 1124 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639835387
• Product: multi-sensor hybrid histidine kinase
• Protein accession: YP_982605
• Protein GI: 121605276
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.506766
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATTGACG CAGAGCCGCC CAGCATCAGC AGCGCTGGCC TCGAACCCTT GGCCGCACGC 
TCTAAAGCAT CCACATTTGC CATGGGTTCC ATTCTTGGCC CCGCGCGGCG CTTGATGGAC 
AGCTTGACCT ATCCGCGCAA ATTCCTGCTG ATCTTTCTGC TTTTTGCGCT GCCGCTGGGG 
CTGACGCTCT ATCTTTTGGT CGGAGAAATC AACCGCTCGA TCCAGTTCGC CGAAAAGGAA 
ATCGCGGGCG TGCATTACCT GCGCCCTTTG CGCTCGCTTC AGGAACAGGT CGCGCGCAGC 
CGGCTGGTCG CCGCCGCCTA CCGGAGTGGC CAGGCCGACC AGCGGCCCGA ACTGGTGAGG 
GTGCAGGCAA GCATCAAGGC CGGGCTGGCC GAACTTGACC AGATCGATGC ACAGCTCGGA 
GGCGAGCTTG AGTCCACCGC CAAACTGGGC ATCATCAAGG AAAACGCCCT CTTCCTCTCT 
CGCCGGCTGC TCGACGTGCC ACCCGTGAAC ACCGACGCGC TGCACGGCAT GCTGCAAGAT 
GACATCAGCA CGCTGGTGGC GCATGTAGGC GATATCTCCA ACCTGATCCT CGACCCCGAC 
CTGGACTCGT ATTACCTGAT GGAGGCGGTC CTGCTCAAGC TGCCCGATGC CGCCGACCTG 
CTGCTGCAGG CCCGGCTGCT GGTGCAGGCC CGCAGCCAGG CGCCGATGCA AAAACTCCCC 
CTGCGGGCCA AGGAGGGGGA AAACGCCGAC CTGATCCGGC TCAGCGGCCT GATTGAATCC 
AATCTGAGCC GTACCCAGTA CGGCGCCCAG ACGGCATTCA AGAATGAAAA AACCGGCCAG 
CTCAAGCTGC GCCTGACCGA CGCGGTGCAA TCCTATAACC AGGCCATCAA GGACGCTGTG 
GCCGCCCTGC GCAGCCTGAC AGAGCCTGAA GCAGTGCCGG CCAGCGCCGA CACGGCCGGG 
CAGTTGCTGA CGCGCGGGCA AGCCGCCAAT TACGTTTTGG GCGAGCGTGA GTCGGCGGAA 
CTGGAAACCC TGCTCAAGAC ACGCATCCAG AGCTTTCAGC AGCGCATGCT GGGGGTGATC 
GTCTTCGTCG CTGCCGTGCT GACCGTCGTG CTTTACCTGC TGCTGGCCTT TTATGCCGGT 
GTGATGCGAA CCGTCACGCG CCTGCGCGAA GCTTCGGAGC GCATGCTGGA CAACCGCGAG 
GACAAGGCCA TCACGCTGGA CACGCACGAC GAACTGGGCG AAGTCGTGCT GGCCTTCAAC 
CGCGTGGCCG ACCGGATGCG CACGGAGAAG ACGCAAGCCG AAGTCGAAAG CCGGCGCGCC 
CGCGCGGCCG AAGAAGAGGT TCGCTCGCGC GAGTCCGAAC TGGTTCGCGC GCGCCAGGTC 
GCCGAGGAGG CGGTGCGCGC CAAGGCGGCA TTCCTGGCCA CCATGAGCCA CGAGATCCGG 
ACCCCGCTCA ATGGCGTGGT CGGCATGAGC ACCCTGCTGG CCGAAACCGC TCTCGATGCC 
GAGCAGCGCG ACATTCTTCA GACCATCAGG CTCTCCAGCG ACCAGTTGCT GGCGGTGATC 
AGCGACATCC TGGATTTTTC CAAAATCGAG TCGGGCCGGT TTGATCTGGA GAGCGAACCC 
GTCAGCGTAC ACAACATGAT CGAGGAAGCC TGCGACATCG CCGCGCCGCG CGCCCGCGAA 
AAAGGCATCG AGCTAATCGT TGACGTGCCG GGCGCGGCGG CTGGCGGCCC GCCACCGGCC 
ATCCTGGGCG ATGTGACACG CCTGCGCCAG ATTCTCATCA ACCTGGTCAA CAACGCGGTC 
AAGTTCACCG AACATGGTGC GGTCTCCGTG CACAGCCGGC TGGCCGAAGC GCCCGATGAG 
CAGGGACTGG CCCTGATCGA GTTCAGCGTG CACGACACCG GCATCGGCAT TCCTCCCGAG 
CGCGTGGGCG CGCTGTTCGA GGCCTTCATG CAGGTCGATG CATCGACCAC GCGCAAATAC 
GGCGGGACCG GCCTGGGCCT GGCCATCTGC AAGCGCCTGG TCGAACTGAT GGGCGGCAAG 
ATCAGCGTCA CAAGCAAGCT CGGCAAGGGT TCGATTTTTT CATTCACCGT GCGCGCCGCG 
CTGGCCGAGT TGCCCAAGGA GCTGACGCCG CTCGACGCGG CGGCTCTGCA GGACAAGCGC 
GTTCTGGTGG TGGACGATCA CCATGTGAAT GTCCGGGTGC TGATGCGCCA GTTGCGGCAG 
TGGGGCATGC GCGTGGCCAG CGCCGTGTCC GGTGCCGCGG CGCTGGACGT GCTGGACCAT 
ACCCAGCTGC CAGATGTCAT CATCACCGAC ATGCACATGC CGGGCATGGA CGGCCTTGAG 
CTGGCCGGCC ACATCCGCGA AAGGCCCGGC AGCGAAAACC TGCCGCTGAT ACTCCTGAGT 
TCCGGCTTCA TGCCAGGCGG AGCAAGCGCC GGCCCCTTCA ATGCCAGGTT GCTCAAGCCC 
GCGCGCCAGA ACCAGCTTTT CGAGGCGCTG GCCCGCTGCC TGACTTCCGA CTCGGTGCTG 
CAATCCATCA AGGCAGAGCG GGTGGACATC CGGAAAAACG TGACCATTCT GGTTGCCGAC 
GACAACGTGG TGAATCTGAA AGTGGCCTGC GGTATTTTGG CCCGGCTGGG CTATGACGCC 
GTCACCGCCG CCGATGGCGT GCAAGCCGTG ACGGCCGTGG CCGACAGCAT GAACAGCGCA 
AGGCGCTTTG GCGCCATCCT GATGGACCTG CACATGCCGG GCATGGACGG GCTGGAAGCC 
ACGCAGACAA TCAAGAAACG ATTTGGCCAT GCAGCGCCGC CCATCATCGC CCTGACGGCT 
GACGCCTCCA TCGAAGACCG GGAACGCTGC GAAGCCGCCG GCATGGATGA TTACCTCACC 
AAGCCCTTGC AGGTGGTCGA GTTGACCCGC GCGCTGGCGC GCTGGGCGGA AACCTCGGCT 
TTTGAACCGG TCGCCAGCGC CCTGCCCGCG TACTTGGCTT CTCCCGCTTC TCCCGCTTCT 
CCCGTTAAAA GAGCCGTGGA CTTCACCCGG CTCGAAGAAT TTCGTGAATT TGACCCCGAC 
CTGGAGACCG CGCGCGAAGT CATTGAAATT TTCATGGCTG ACACGCCGGC GCGCCTGGCC 
GCCATTGCCG ATGCGCAAAC AGATGCAGCC CTGCTGGCCG AAGCCGCTCA TGCGCTCAAA 
GGCTCGGCAT CCAACGTCGG TGCGCAGGCA CTGGTCGCGC TGACAGCAAG AATCGAGGAA 
CTGGCCATGT CAGGCGCCAT TCCACCCGAC ATGGATGAGG TCTTGCGACA CCTCGATGAA 
AGCTGGCTGC TCACGCAAAC CGAACTGAAG GCATGGCTGA CCACCAACGC AAAAGCGGCC 
ATCAGCCAGC CTTGA 

 

Protein sequence

MIDAEPPSIS SAGLEPLAAR SKASTFAMGS ILGPARRLMD SLTYPRKFLL IFLLFALPLG 
LTLYLLVGEI NRSIQFAEKE IAGVHYLRPL RSLQEQVARS RLVAAAYRSG QADQRPELVR 
VQASIKAGLA ELDQIDAQLG GELESTAKLG IIKENALFLS RRLLDVPPVN TDALHGMLQD 
DISTLVAHVG DISNLILDPD LDSYYLMEAV LLKLPDAADL LLQARLLVQA RSQAPMQKLP 
LRAKEGENAD LIRLSGLIES NLSRTQYGAQ TAFKNEKTGQ LKLRLTDAVQ SYNQAIKDAV 
AALRSLTEPE AVPASADTAG QLLTRGQAAN YVLGERESAE LETLLKTRIQ SFQQRMLGVI 
VFVAAVLTVV LYLLLAFYAG VMRTVTRLRE ASERMLDNRE DKAITLDTHD ELGEVVLAFN 
RVADRMRTEK TQAEVESRRA RAAEEEVRSR ESELVRARQV AEEAVRAKAA FLATMSHEIR 
TPLNGVVGMS TLLAETALDA EQRDILQTIR LSSDQLLAVI SDILDFSKIE SGRFDLESEP 
VSVHNMIEEA CDIAAPRARE KGIELIVDVP GAAAGGPPPA ILGDVTRLRQ ILINLVNNAV 
KFTEHGAVSV HSRLAEAPDE QGLALIEFSV HDTGIGIPPE RVGALFEAFM QVDASTTRKY 
GGTGLGLAIC KRLVELMGGK ISVTSKLGKG SIFSFTVRAA LAELPKELTP LDAAALQDKR 
VLVVDDHHVN VRVLMRQLRQ WGMRVASAVS GAAALDVLDH TQLPDVIITD MHMPGMDGLE 
LAGHIRERPG SENLPLILLS SGFMPGGASA GPFNARLLKP ARQNQLFEAL ARCLTSDSVL 
QSIKAERVDI RKNVTILVAD DNVVNLKVAC GILARLGYDA VTAADGVQAV TAVADSMNSA 
RRFGAILMDL HMPGMDGLEA TQTIKKRFGH AAPPIIALTA DASIEDRERC EAAGMDDYLT 
KPLQVVELTR ALARWAETSA FEPVASALPA YLASPASPAS PVKRAVDFTR LEEFREFDPD 
LETAREVIEI FMADTPARLA AIADAQTDAA LLAEAAHALK GSASNVGAQA LVALTARIEE 
LAMSGAIPPD MDEVLRHLDE SWLLTQTELK AWLTTNAKAA ISQP