Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2366 |
Symbol | |
ID | 4687728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2491032 |
End bp | 2491883 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639835376 |
Product | periplasmic binding protein |
Protein accession | YP_982594 |
Protein GI | 121605265 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAC CCACCAGCGG CTGGCGCGCA CTGGCCGCCA GCCACGACAG CAGCGCCTAT GGCCCGCAGC GCATCGTCTG CCTGACCGAA GAACCCACCG AATGGCTGTA CCTGCTGGGC GAAGAGCGGC GCATCGTCGG CATTTCGGGC TACACCGTTC GCCCGCCGCG TGCGCGCGAC GAAAAACCCA AGGTCAGCGC CTACCTGAGC GCCAAAATCG ACAAGATCGT TGAATTGCGT CCCGACTGCG TGATCGGCTT TTCAGACCTG CAGGCCGACA TCGCGGCGCA GCTGATCAGG CACGGCATCC AGGTCACCAT CTTCAACCAG CGCAGCGTGG CCGAGATTTT CTCGATGCTC TACCAACTGG CCGCCATGGT CGGGCAGGCC GAGCGCGGCC TGGGGCTGAT TCACGCCATG CAGCAGCGGC TGCTTGACAT CGAGCAGGCG GCGGCCAGCC TCAAGCGCCG CCCGCGCGTG TTCTTCGAGG AATGGCACGA CCCGCACATC AGCTGCATTG CCTGGGTGTC CGAACTGGTC GGCATTGCCG GCGGCGACGA CTGCTTTCCC GAACTGGCGA AAGAACCCAT GGGCAAGGGC CGCATCATCG CCGACGGACT GGAGATCGTG CGGCGCGCGC CCGACATCAT TTTCGGCTCC TGGTGCGGCA AGAAGTTCAG GCCCGAGCTG GTCGCGGCCC GGCCCGGCTG GGAAAACGTG CCGGCCATCA AAAACAATCA GCTGTTCGAG ATCAAGTCGT CCGAAATCCT GCAGCCCGGA CCGGCTTCGC TGACCGATGG CGTCGAGAAG CTGCACAAGT TCATCATGGA CTGGGGCCGC CAGCATGGTT GA
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Protein sequence | MTEPTSGWRA LAASHDSSAY GPQRIVCLTE EPTEWLYLLG EERRIVGISG YTVRPPRARD EKPKVSAYLS AKIDKIVELR PDCVIGFSDL QADIAAQLIR HGIQVTIFNQ RSVAEIFSML YQLAAMVGQA ERGLGLIHAM QQRLLDIEQA AASLKRRPRV FFEEWHDPHI SCIAWVSELV GIAGGDDCFP ELAKEPMGKG RIIADGLEIV RRAPDIIFGS WCGKKFRPEL VAARPGWENV PAIKNNQLFE IKSSEILQPG PASLTDGVEK LHKFIMDWGR QHG
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