| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1848 |
|---|
| Symbol | |
|---|
| ID | 4689663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1970452 |
|---|
| End bp | 1971399 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639834854 |
|---|
| Product | putative glutathione S-transferase-related protein |
|---|
| Protein accession | YP_982079 |
|---|
| Protein GI | 121604750 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.417859 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC CTCCGACCCT GATTTTTCAC CATTACCCGT CCTCGCCTTT TTCCGAAAAG
GTCCGGCTGA TGCTGGGCTA CAAAAACATT CCCTGGAAGT CAGTGGTCAT CCCGATGGTT
AGTCCCAAGC CCGACCTTAT TGCTCTCACG GGGGGCTACC GCAAGACGCC GGTGCTGCAG
ATCGGCGCCG ACATCTATTG CGACACGGCG CTGATTGCCG ATGTGCTGGA GCACATCCAG
CCGCTGCCCA CGCTGTACCC CGAACCCAGC AAGGGCATGG CGCGCATCCT GGCGCAATGG
GCTGATAGCA CGCTGTTCCA GACTGCCATG GCCTATAACC TGCAGCCCCG GGGCCTGTCC
CAGCTGTTCG AGCATGCGCC GCCCGAGGCC GCCCAGGCGT TTGTGCAAGA CCGCAAGGCC
ATGAGCGCGG GCATGGCGCG CCAGCGCCCG CAGGATGCCA CGGCGGCCTA CAAATCTTAT
TTGCGCCGCC TGTCGGACAT GCTCGACGTC CGGCCGTTCA TCCTGGGCGA CGTGCCGTGC
ATCACCGACT TTGCGATGTA CCACCCGCTG TGGTTCACGC GGGTACGCAC CTCGGTGCTG
GCCGGCCTGC TGGAAGCCAC GCCAGCGGTG CTCGACTGGA TGGATCGCAT GGCCGCCATC
GGTCACGGCG CCATGGAAAA GTCCAGCGCG CTGCAAGCCA TCCAGGTCGC CGCCGCTTCG
GTGCCTGCGG CCTTGCACGA CGACATTTTT CAGGACGAGC ATGGCATTGC GCTGGGCAGC
CAGGTCGTGG TCAGCGCCGA AAGCTTTGGC CTGGAGCCTA CGCATGGCGA ACTGGTGGCC
GCCACCCGCA TGCACTACAC GCTGCGCCGC ACCGACGAGC GCGCCGGCCT GGTGCATGTG
CATTTCCCGC GCATCGGCTA TTCGCTCAAA CCCGGCGAGG CGGCATGA
|
|---|
| Protein sequence | MTTPPTLIFH HYPSSPFSEK VRLMLGYKNI PWKSVVIPMV SPKPDLIALT GGYRKTPVLQ
IGADIYCDTA LIADVLEHIQ PLPTLYPEPS KGMARILAQW ADSTLFQTAM AYNLQPRGLS
QLFEHAPPEA AQAFVQDRKA MSAGMARQRP QDATAAYKSY LRRLSDMLDV RPFILGDVPC
ITDFAMYHPL WFTRVRTSVL AGLLEATPAV LDWMDRMAAI GHGAMEKSSA LQAIQVAAAS
VPAALHDDIF QDEHGIALGS QVVVSAESFG LEPTHGELVA ATRMHYTLRR TDERAGLVHV
HFPRIGYSLK PGEAA
|
|---|
| |