| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1833 |
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| Symbol | |
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| ID | 4688429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1953201 |
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| End bp | 1954307 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639834839 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_982064 |
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| Protein GI | 121604735 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01765] transposase, putative, N-terminal domain
[TIGR01766] transposase, IS605 OrfB family, central region |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.383909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG TGGCGAACAT TAAACTCACC CCGACGCCGG AGCAGGCGGA GGCGTTGCGC
GCCACGCTTG AGCGATGCAA TGAGGCTTGC AACTGGCTGT CCGAGCAGGC GTTCGCCACG
AAGACAACTC GCCAGTATGA CATGCACAAG TCGTTCTACG CTCAGGTGCG TGAACGCTTT
GGACTGTCGG CTCAGGCAAC TGTCCGGTGC ATCGCAAAGG TCGCCGACGC CTACAAGATT
GACCAGAAAA CGCTGCGTGT TTTTCGCAAA CATGCGGCCC AGCCCTACGA TGACCGCATC
TTGTCGTTCA AGCCGGACGA CATCGTGTCG CTGTGGGTGC TGTCTGGTCG CACCAAAGTA
GGCTACGTTT GCGGCGACCA TCAGCGCAAG ATGCTGGTGT ACCGCAAGGG CGAGGTTGAC
CTGATGCTGG TGCGCGGCCA GTGGTATCTG GCCGCTGTCT GCGACTTCGA CGATCCTGCA
TTGCTCACGC CGGGCGGCAT GCTGGGTGTG GACTTCGGCA TCGTCAACAT CGCCACCGAC
AGTCTGGGCA AGCAGCACTC CGGGGCGGCC GTCGAGGCGT ACCGGGCGCG TTACGCCAAA
CGCCGGACTA CATTGCAAAG CGTTGGCACG AAAGCGGCCA AGCGCTGCCT GCGCAAAATG
AGCGGAAAAC AACGGAGATT CCACAAGCAC GAAAATCATT GCATTTCCAA AAGCATCGTT
GCTACTGCTG AACGCTCCGG GCTTGGTATT GCGCTGGAAG ACCTGACGCA CATCCGGGCA
CGGGCCAAGG CCCACAAAGA GCAGAGAAAA CGATTGCATA ACTGGTCCTT CGCGCAGTTG
CGCGGCTTTG TTGAATACAA AGCCAGGCAA GCCGGCGTCC TGTGTGAGTC TGTCGATCCC
AGATACACGA GCCAGCAGTG CTTCGCGTGC GGACACATCG CCAGACAGAA CCGGAAAAGC
CAGTCGAAGT TTTTGTGTGT GGCCTGCGGA CACGGTGATC ACGCAGACCA TAACGCCGCT
GGCAACATAG CCAGCAGGGC TACCGTAAAC AAGCCTATGT TCGCGCATCT GTATGTCCCA
GGTGCAGTGG AAAGCCCCCT CCTTTAG
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| Protein sequence | MKLVANIKLT PTPEQAEALR ATLERCNEAC NWLSEQAFAT KTTRQYDMHK SFYAQVRERF
GLSAQATVRC IAKVADAYKI DQKTLRVFRK HAAQPYDDRI LSFKPDDIVS LWVLSGRTKV
GYVCGDHQRK MLVYRKGEVD LMLVRGQWYL AAVCDFDDPA LLTPGGMLGV DFGIVNIATD
SLGKQHSGAA VEAYRARYAK RRTTLQSVGT KAAKRCLRKM SGKQRRFHKH ENHCISKSIV
ATAERSGLGI ALEDLTHIRA RAKAHKEQRK RLHNWSFAQL RGFVEYKARQ AGVLCESVDP
RYTSQQCFAC GHIARQNRKS QSKFLCVACG HGDHADHNAA GNIASRATVN KPMFAHLYVP
GAVESPLL
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