Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1789 |
Symbol | |
ID | 4687363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1903901 |
End bp | 1904704 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639834795 |
Product | ABC-type transport system ipermease component |
Protein accession | YP_982020 |
Protein GI | 121604691 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.047158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCAT CCGCTAGCTG GCACCGCCGT CTGACACGAA CAGGTCAGGC TGCGCAGCAG TGGTTCATTG AATGGTGGCA ACTGATCCAC CTGGGCGCGG TCATCCTGGT GCTGACACTC TCGCCATCGA GCTACCGGCG TGAAAACCGC CTGGTGCTGG GCCGGCATAT CTATATGAGC ACGGCGCCCA TTTTGCTGGG CTTTTCCCTG CTGTGCGCGC TGGTGACCGT GGTCATCACG CGCATCGTGA TGGTGACCGC GCTCAGCTAT GGCCTGTCGC AGTATGCGCT GCAGGTCGTG ATCCGGGTGC TGGTGCTGGA GCTGATTCCG CTGTCCGCCG CGCTGTTCGT GGCGCTGCGC TGCACGATTC CCGATGGCGC GGAACTCACC GCCATGCAGG CCAGCGGCGA GCTGGACGAG ATGCGCAGGC AGGGCGTGGA GCCGATACGC CGCGAGGTGC TGCCGCGCGT GGTGGCCGGC ATGTTTTCGG GCATCACGCT GGCCGCGCTC AGTTGCGTGG TGGCGGTGAT GGTGGCGTAT GTCGCGGTCT ATGGATTTGC CGTGTCGGGG CTGGCGGTCT ATACGCGGCT GTTCGGGCAG GTGTTCACGC CGGCCGTCAC GCTGATCTTT GTGCTGAAAA CCGTGTTTTT TTGCCTGGCC GTGTCGTTGA TACCGATGGC CTCGGCGCTG TACGGAATGC GCGGCGCCAA CATTCGCAGC AGCGCCGAAA TGCGCGGCCT GGTCCGCATG TTCGCGGTGT TGCTGCTGGT TGAAGTGGCT TCGCTGGTCG GCAACTATTA TTGA
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Protein sequence | MTPSASWHRR LTRTGQAAQQ WFIEWWQLIH LGAVILVLTL SPSSYRRENR LVLGRHIYMS TAPILLGFSL LCALVTVVIT RIVMVTALSY GLSQYALQVV IRVLVLELIP LSAALFVALR CTIPDGAELT AMQASGELDE MRRQGVEPIR REVLPRVVAG MFSGITLAAL SCVVAVMVAY VAVYGFAVSG LAVYTRLFGQ VFTPAVTLIF VLKTVFFCLA VSLIPMASAL YGMRGANIRS SAEMRGLVRM FAVLLLVEVA SLVGNYY
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