| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1616 |
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| Symbol | |
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| ID | 4687414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1702567 |
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| End bp | 1704435 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639834619 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_981851 |
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| Protein GI | 121604522 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0311969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTTTTT CCGTCGTCCA GCTGCTCGGC GGACTGTCTT ATGCCACGAC GCTGTTCCTG
ATGGCGGCGG GGCTGACGCT GATTTTCGGC GTCACGCGCA TCGTCAATTT CGCGCATGGC
AGTTTTTTCA TGCTGGGCGC GCTGTTCACC GCGCACTGGG TGACGAACTG GTTTCCGGCC
TGGGGCGAAA GTGGGCTGCT GTACCTGATT GCTATTTTTT TAGGAGCTGC CTGCGCAGGA
CTGGCGGGCG CAATAGCCGA ATATCTCTTG TTGCGGCGAA TGTCGGACGC CCCCGAGCTG
TACCAGCTGG TCGCCACCTT CGGCCTCACG CTGGCGATGC ATGACGCGAT GCAGTGGGGC
TTCGGGCCGG ACGAGGTGTT TGCGCCGCGT TTTCCGGGGC TCAAGGGCTC GGTGCAGATC
GGCGACGAAT TTTTCCCCGT GTACCAGCTG GCGATGATTG CGCTCGGGCC GCTGGTCTGG
CTGGGCCTGC ATGTGCTGCT TCGCCGTTCG CTGTTTGGTC AGCGCCTGCG CGCCGCCACG
CAGGACCGCT CGATGCTGGC CGCGCTGGGC GTCAACCCCA GGCCGCTGAT GCTGGGCGCG
GTGGTGCTGG GCTGCGCGCT GGCCGGGCTG GGCGGCGCGC TACAGTTGCC GCGCGAACCG
GCGCATCTGC AAATGGACAT GAACGTGATC GTCGAAACCT TCGTGGTCGT CGTGACCGGC
GGGCTGGGCA GCATCGGCGG CGCGTTTGTC GCGGCCCTGT TGATTGGCCT GGTGCATGCC
TTTGGCACCG CTGCGTTTCC CCAAGCGACG CTGGTCGTCG TGTTTTTGAC GATGGCGGTG
GTGCTGGTGT TCCGGCCGCA GGGGCTCAAG GGCAGTTCGC CAGAGCAGGG CGGCCATCGG
GAGGCGGCGC AGAAGTTTCG CGGCCTTCGG CTGGGGCGCG CCTGGACGTC GGTGATTGCG
TTGGCCTTCG TGTTGCTGGC TGGACTGGCC TGGTCGGGCG GGGCCTACTG GCAGACGCTC
GCCGCCGATG CGCTGATCCT GATGATCTTC GGCATCAGCC TGCAGTCCAT GATGGCGCTG
GGCGGGCTGG TCAGCTTTGG CCATGCGGCG TTTTTTGCCC TCGGCGCTTA CGGCGCGGCG
CTGTCGCACA GCCTGTGGGG CGCAACGCTG CCGGTGGCGC TGGCGACTGG CTGCGGCGCG
GCGCTGGCCG TCGCTGGCGT GTTCGGCGCG GCGGTGGTCA GGAGCAGCGG CGTGTACCTG
GCGATGCTGT CGCTGGCGCT GGCGCAGGTG GTCTGGGCCG GCGCGGCGCA ATGGGTGAGC
CTGACGGGCG GCGACAACGG GCTGATCGGC CTCGCGCTGG TAACCGACGA CGGCCGGCCG
GTTTTTTATG CGCTGCTGGT GGCACTGGCC TTGATCGCGG TGTTCGCGCT GCGGTTCTTG
AGCCGGTCGG TGATGGGGGC GGCGCTGCAG GCCGTGCGTG ATGCACCGTT GCGCGCGGCG
GCGTCCGGCT TGTCGGTCGG TTGGCTGAAA TACCGCGTTT TTGTCGAAAG CGCGGTGCTG
GCGGGCCTGG CGGGTGGGCT GTTTGCGGCC CATAAAGGGG CGGTGTTTCC GTCGCTGGCG
GCCGTCTCCA CCTCGGTCGA TGCCTTGCTG GTGGTGCTGC TGGGCGGTGT GCATCAGCTC
TGGGGCGCGG TCGTCGGCAG CCTGGTGCTG ACGTATGCAA GCGCCGAGCT GGGCCGCGAA
GTGACTTACT GGCGCGGCCT GCTGGGCGTG TTCATCATGC TGATCATGGT GGCTTCGCCG
TCGGGGCTGC TGGGCCTGCT TTCACGCTTG GCCGGGCGGC GCCAGCGTGC CATCGCGGGG
AGCCGCTGA
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| Protein sequence | MTFSVVQLLG GLSYATTLFL MAAGLTLIFG VTRIVNFAHG SFFMLGALFT AHWVTNWFPA
WGESGLLYLI AIFLGAACAG LAGAIAEYLL LRRMSDAPEL YQLVATFGLT LAMHDAMQWG
FGPDEVFAPR FPGLKGSVQI GDEFFPVYQL AMIALGPLVW LGLHVLLRRS LFGQRLRAAT
QDRSMLAALG VNPRPLMLGA VVLGCALAGL GGALQLPREP AHLQMDMNVI VETFVVVVTG
GLGSIGGAFV AALLIGLVHA FGTAAFPQAT LVVVFLTMAV VLVFRPQGLK GSSPEQGGHR
EAAQKFRGLR LGRAWTSVIA LAFVLLAGLA WSGGAYWQTL AADALILMIF GISLQSMMAL
GGLVSFGHAA FFALGAYGAA LSHSLWGATL PVALATGCGA ALAVAGVFGA AVVRSSGVYL
AMLSLALAQV VWAGAAQWVS LTGGDNGLIG LALVTDDGRP VFYALLVALA LIAVFALRFL
SRSVMGAALQ AVRDAPLRAA ASGLSVGWLK YRVFVESAVL AGLAGGLFAA HKGAVFPSLA
AVSTSVDALL VVLLGGVHQL WGAVVGSLVL TYASAELGRE VTYWRGLLGV FIMLIMVASP
SGLLGLLSRL AGRRQRAIAG SR
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