Gene Pnap_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1506 
Symbol 
ID4689379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1595444 
End bp1596745 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content67% 
IMG OID639834509 
Producthypothetical protein 
Protein accessionYP_981741 
Protein GI121604412 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTACAG AACCCTTCCC CTCTTCATCT TCCTCCCCGG CCGCCGACAG CCCGAAGCTG 
ATCGACTCCC CGCTGATGAG GCGCGCAGGC CCCGAGTTGC TGTCGCTGGC GCTGATGGAT
GCGCGCAACC ACACGCTGCA CCTGTTTGGC CAGTACCAAA ATACGCTGGA GGCGGGGAAC
TTCAAGGTGC CCCAGATGCC GGCGCTGAAC CCGCCGCTGT GGATGCTCGG CCATGTGGGC
TGGTTCCAGG AACGCTGGAT TGGCCGCAAC CTGCAGCGGG CGCTGGGCAG CCGCTGCGAG
CCCGGCCACT CCCGGCTGGC GTCGATGGAG CCGAACGCAG ACCGCTGGTG GGATCCGGGC
CAGGTGCCCC ATGACAGGCG CTGGACGCTG GACCTGCCGG ACATGGGCGA CTGCCGTGCG
TATCTGCTCG AGACGCTGGA AAGCACGCTC GAATTGCTGG AAAAGGCCGG CACCGATGAC
GATGCCCTGT ACTTTTACCG GCTGAGCCTG TTTCACGAAG ACCTGCAGGA CGAAGCCCTG
ACCTGCATGG CGCAGACCCT GGGCCTGCCG CTGGACAAGC CTCTGCAAAC CGCGTTCACG
CCGTCGCCGA TGGTGCTGCG CGAGCCGATG CTGGTTCCGG CCACGACCTG GCGCATGGGC
AGCGCGTCAG GCGCCGGGGC CGGGTTTGCG TTTGACAACG AACAGCAGGT GCATGCCATC
AGCGTGCCCG AGTTTGAGAT CGACGCCCAG GCCGTGACCT GGTCGCAGTA CGTCGAGTTT
GTCGCCGATG GCGCTTATGA CCAGCCGGCG TTCTGGCATC CCGACGGCTG GCAATGGCTG
CAGGCGCTGG CGGCAGTCGA GGGCCGGCGC GGCCCGCGCT ACGTGGAGCA GATCGGCATC
GGCAGCGGCG CCGTCATCCA GACCCGTTTT GGCCAGCCCA TGCGCATGCA GGGCACGCAG
CCGGCGATGC ACCTGAGCTG GTGGGAAGCC GACGCCTGGT GCCGCTGGGC CGGGCGCCGC
CTGCCGGCCG AGGTGGAGTG GGAGGTGGCC GCGCACACGG CGGCGCGCCG GGGCTTTCGC
TGGGGCGATG TGTGGGAATG GATGGGCACG ACCTTCAGGC CGTATCCGGG CTTTGCGCCC
GACCCCTGGC GGGCGTATTC GGAGCCTTCG TTTGGCACGC ACAAGGTGCT GCGCGGCGCG
TCGTTTGCCA CCCGGGCGCG GCTGAAACAT CCCAATTTCC GGAATTTTTA CCGGCCGGAG
CGGGATGACA TCTTTTGTGG ATTCAGGTCT TGTGCGCTAT GA
 
Protein sequence
MATEPFPSSS SSPAADSPKL IDSPLMRRAG PELLSLALMD ARNHTLHLFG QYQNTLEAGN 
FKVPQMPALN PPLWMLGHVG WFQERWIGRN LQRALGSRCE PGHSRLASME PNADRWWDPG
QVPHDRRWTL DLPDMGDCRA YLLETLESTL ELLEKAGTDD DALYFYRLSL FHEDLQDEAL
TCMAQTLGLP LDKPLQTAFT PSPMVLREPM LVPATTWRMG SASGAGAGFA FDNEQQVHAI
SVPEFEIDAQ AVTWSQYVEF VADGAYDQPA FWHPDGWQWL QALAAVEGRR GPRYVEQIGI
GSGAVIQTRF GQPMRMQGTQ PAMHLSWWEA DAWCRWAGRR LPAEVEWEVA AHTAARRGFR
WGDVWEWMGT TFRPYPGFAP DPWRAYSEPS FGTHKVLRGA SFATRARLKH PNFRNFYRPE
RDDIFCGFRS CAL