Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1374 |
Symbol | |
ID | 4686151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1462279 |
End bp | 1464615 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639834377 |
Product | hypothetical protein |
Protein accession | YP_981610 |
Protein GI | 121604281 |
COG category | [R] General function prediction only |
COG ID | [COG4258] Predicted exporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00292609 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCCGCC GCGGCATGAC GGCGATTGCG CTGTGGCTGG CGTTTTTGCT GGGCTGCGGC GCCATCATCA GCCGCACGAC ATTCACCACC GACCTGTCGG CATTCCTGCC GCGCACGCCC ACGCCCGAGC AGCAATTGCT GATGGACCAA CTGCGCGACG GACTGGCGTC GCGCCTGATC CTCGTGGGCA TTGAAGGCGC CGACGCACCT ACCCGGGCCG GGCTTTCCAG ACAGATTGCC CTGCGCCTGC GTGCCGACCC TGCTTTTGCC AGCGTCAACA ATGGCGAGCC GGTGAACACC GGGCACGACC AGGCCTTCCT GTTCAACCAC CGTTACCTGC TGAGCCCTGC CGTGACGCCC GCGCGATTCA GCGCCGACGG CCTGCATGCC GCCCTCGGCG ACAGCATCGA CCTGCTCGCC TCGCCGGCCG GGCTGCTGGC CAAGGGCTTG CTGCCGCGCG ACCCGACCGG CGAAATGGTG CGCTTGCTGG AGCAGCTCAA CAGCGGCAGC CGGCCGCACC TGGTGGACGG CGCCTGGGCC GCGCGCGATG GCGCGCGCGC CCTGCTGCTG CTGCAGACAC GCGCGGCAGG CTCCGACACC GATGCCCAGC AAGCCGCCAT GGCCGCCATC CAGCAGGCGT TTGACACTGC AGCCGGCGGC ACGGCGGCGG CCAGGCTGGT GATGACCGGC CCCGGCGTGT TTTCAGTCAC CTCGCGCGAC ACCATCAAAA GCCAGGTCAG CCGCCTGTCG CTCATCAGCG TGGTGCTGAT TGCGGCGCTG CTGCTGCTGG TGTACCGCTC GTTCAGCGCG CTGGCATTGG GTTACTTGCC GGTCATCAGC GGCGCGCTGG CCGGCATTGC CGCCGTCAGC CTGGGGTTTG GGTCGGTGCA TGGCATCACC CTGGGATTCG GCACTGCCCT GATCGGCGAA GCGGTGGACT ATTCCATCTA CCTGTTCGTG CAATCCGAAG AAGGCGCGGA CAAGCAGCAG GACTGGGTCA AGCGCTTCTG GCCCACCATC CGGCTCGGCG TGCTGACGTC CATCGTCGGT TTCGCGTCCC TGCTGCTGTC GGGTTTTCCG GGCTTGGCGC AACTGGGCCT GTATTCGATT GCCGGGCTGG TCGCCGCCGC CCTGGTGACC CGTTTTGTGC TGCCGCATCT GCTGCCGGAA AAATTCCGCA TCCATGATGT CTCGGCCATC GGCCGGCTGC TGGCCCGGCT GGCGCGCCGC GCCCCGGCAC TGCGCTGGCC GGCGGTCATG GTGCTGCTGC TGGCCTGCGG CATCCTGGCC GCCCAGCGCA ACAGCCTGTT GAACGACAAG ATATCTTCAC TCAGTCCGGT GTCGCAGGCC GATGTCGCGC TTGACGAGCG CTTGCGCGCC GATATGGGCG CGCCCGATGT GCGCTATCTG GTGGTGGTTG CCGGCACCAG CCGGGAAGCC GTCCTGCGTT CGTCCGAGCA GGTTGCCCAA GTGCTGCAAA CGCAGGTCGA TCAGGGCGAA CTGGCCGGAT TCGAGAGCCC CAGCCGCTAC CTGCCCAGCA CCCAGACGCA ACTGGCGCGC CAGGCCAGCC TGCCCCCGCC CGCCGTGCTC GAAGCGCGCC TGGCCCAGGC GGTGCAGGGT TTGCCGGTCA GCGCGCCCGT GTTCAAGCCG TTTCTGGCCG ATGTCGAAGC TGCCCGCAGC CAGCCCTTGC TGCAGGCCGC CGACCTTGAA AAAACATCCA TGGCCATGGC GATTGATGCC TTGCTGATTG AAAAAAACCA GCAATGGCGC GCCTTGCTGC CGCTGACCGC GACCGAGGGC GGCAGCATCA ACGCGGCCCG CATTCGCGCG GCCTTGAGCG CAAGCCCTCT GGCAGATGTC CTGCTGGTGG ACATGAAAGC CGAATCGGAC CGCCTGTATT CCGGCTACCT GCATGAAGCC GTGCTGCTGT CGCTCAGCGG CGTGGCCGCC ATTGCCGGCT TGCTGCTGCT GGTGTTCCGC TCGCCGATGC GCGTGCTCCG GGTCATTGCG CCGCTGGTCG CTGCGGTGAT CACCGTCACG GCCGGATTGG CCCTGCTGGG CCAGCCACTG ATCATTCTGC ATCTGGTGGG CTTGCTGCTG GTGGTCGCGG TGGGATCGAA CTACGCCCTA TTTTTTGACC GCCCCGATCC GGGCGTCCCG CTCTCGCCCC GCACCCTGGT CTCGATGCTG TTTGCCAACC TGACCACGGT CGCAGGTTTT GGCCTGCTGG CGTTTTCCAA GGTGTCCATC CTGCAGGCCA TGGGCGCCAC GGTGGCGCCG GGCGTCATCC TGGCACTGCT GTATTCGGCT ATTTTTGCCC GGCAAGCCGA TGCTTGA
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Protein sequence | MRRRGMTAIA LWLAFLLGCG AIISRTTFTT DLSAFLPRTP TPEQQLLMDQ LRDGLASRLI LVGIEGADAP TRAGLSRQIA LRLRADPAFA SVNNGEPVNT GHDQAFLFNH RYLLSPAVTP ARFSADGLHA ALGDSIDLLA SPAGLLAKGL LPRDPTGEMV RLLEQLNSGS RPHLVDGAWA ARDGARALLL LQTRAAGSDT DAQQAAMAAI QQAFDTAAGG TAAARLVMTG PGVFSVTSRD TIKSQVSRLS LISVVLIAAL LLLVYRSFSA LALGYLPVIS GALAGIAAVS LGFGSVHGIT LGFGTALIGE AVDYSIYLFV QSEEGADKQQ DWVKRFWPTI RLGVLTSIVG FASLLLSGFP GLAQLGLYSI AGLVAAALVT RFVLPHLLPE KFRIHDVSAI GRLLARLARR APALRWPAVM VLLLACGILA AQRNSLLNDK ISSLSPVSQA DVALDERLRA DMGAPDVRYL VVVAGTSREA VLRSSEQVAQ VLQTQVDQGE LAGFESPSRY LPSTQTQLAR QASLPPPAVL EARLAQAVQG LPVSAPVFKP FLADVEAARS QPLLQAADLE KTSMAMAIDA LLIEKNQQWR ALLPLTATEG GSINAARIRA ALSASPLADV LLVDMKAESD RLYSGYLHEA VLLSLSGVAA IAGLLLLVFR SPMRVLRVIA PLVAAVITVT AGLALLGQPL IILHLVGLLL VVAVGSNYAL FFDRPDPGVP LSPRTLVSML FANLTTVAGF GLLAFSKVSI LQAMGATVAP GVILALLYSA IFARQADA
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