| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1361 |
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| Symbol | |
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| ID | 4687196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1449679 |
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| End bp | 1450593 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639834364 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_981597 |
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| Protein GI | 121604268 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.260614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0085825 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATCA ATAACCCACT CGATCATCTG CCCGACATGG CCGTATTTGC CCGCGTGGTG
GACGCCGGCA GCTTCTCGGC CGCCGCCCGC CAGCTGGGCA TCACGCCCTC GGCGGTCAGC
CGGCAGGTGG CGCGGCTCGA AGGCGCGCTG CGGGTGCGCC TGCTGGAGCG AACCACCCGC
AAGCTGCGCC TGACCGAGGC CGGCACGGCC GCCTACACCG GCTGCCAGGC CATGGTGGCC
GCTGCGCGCG AGGTGCTGGC GCTGAGCGAC ACGCAGACGG CTACTGCGCG CGGGCTGGTG
CGCATCAGCA TGCCCAAGGC GTTCGGCCGC CTGGTGGTGC ATCCGCTGAT GGCGTCCTTT
CTGCAGCAAT ACCCCGAAGT GGATGTGCAG CTCGTCATCA CCGACCGCAC GGTGGACCTG
TTCGAGGAAA GCATCGACCT GGCCATCCGC ATCACCGATG CGCCGCCGCC GGGGCTGGCC
GGGCGGCCGC TGATGCGGAT TCGCCACCTG GCCTGCGCCA GTCCGCAGTA TCTGGCGGCG
CACGGCACGC CCGGGCATCC GCGCGACCTG GCCCGGCACA GCTGCCTGTA CCTGGGCGAA
GACGAGCGCG ACCGCCACTG GCGGTTCCGG CGCGCCGGGG ACGAAGTCAC GCTCAGGGTG
AGCGGCCGCT ACGTGGCCAA CCACAGCGAA GTGCGGCTCG AAGGCGCCCT GGCGCACCTG
GGCATTGCCA GCCTGCCCGA ATTCACCGCC CGCGCCGCCC TGGCCGCAGG CGAACTGGTC
ACGGTGCTGG ACGACTGGGA GCACGCGACC GACTACGCCG GCATGGCCTG GCTGCTGTAC
CCGCCGAACC GCTTCCTGCC GGCCAGGGTG CGCGTGTGGA TTGACCACCT GGTGGCGGGC
CTGCTGCCCC AATGA
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| Protein sequence | MSINNPLDHL PDMAVFARVV DAGSFSAAAR QLGITPSAVS RQVARLEGAL RVRLLERTTR
KLRLTEAGTA AYTGCQAMVA AAREVLALSD TQTATARGLV RISMPKAFGR LVVHPLMASF
LQQYPEVDVQ LVITDRTVDL FEESIDLAIR ITDAPPPGLA GRPLMRIRHL ACASPQYLAA
HGTPGHPRDL ARHSCLYLGE DERDRHWRFR RAGDEVTLRV SGRYVANHSE VRLEGALAHL
GIASLPEFTA RAALAAGELV TVLDDWEHAT DYAGMAWLLY PPNRFLPARV RVWIDHLVAG
LLPQ
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