Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1342 |
Symbol | |
ID | 4686076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1431777 |
End bp | 1432667 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639834345 |
Product | peptidase M23B |
Protein accession | YP_981578 |
Protein GI | 121604249 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.339231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATTC ATCACTCTGC CCTTCCCCAG CGGCTGCTGT CCCGCCGCTC GGCCCTGCTG GGCAGCGTCG GCCTGCTGGC GCTGCCCGCT TCACGCCTCG CGGCAGCCGC CGCGCCGCCA TCGTCCGAGG TCTGGCCGAA CGCCTTGCAG GTTCCCGGCG GCATCGCCCG GCTGTCGCTG GGTCCGGCGG CAGCGCGTCC CGTGGCGCAT GCGGGCGATG TACCCTTGCT GGTGCTGGGC GACGTGATCG AATGGACGGC GCTGGTCGGC ATTCCGCTGT CGGCCGCGCC GGGCAAGGCG AGCATCACAC TGCAGCTTGA GGGCGGTGGC CAGCGGCAAA TCGCCTACAC GGTGGCCAGC AAGCGCTACA GCGAACAGCG GCTGAAGGTG GCGCCGGGCA CGGTCGATCT GTCGCCCGAA AACGAGGCGC GCTACGAGCG CGAGCGCGCG CACCAGGCCA CGGTCATGGC GACGTTCAGC ACGCCGCTAC CCGATGCGTC GTCGCTGCGC ATGCAGGTGC CGGTGCCGGG GCGGCGCTCC AGCTCGTTCG GGCTGCGGCG CGTGTTCAAC GGCCAGTCGC GCAATCCGCA CAGCGGCATG GACATCGCGG CCAGCACGGG AACGCCGGTG GTGTCGCCGC TGCCGGCACG GGTCATCGAC ACGGGTGACT ATTTCTTCAA CGGCAAGACG GTCTGGCTGG ACCACGGCGG CGGGCTGCTG AGCATGGTCT GCCACCTGAG CGAGATCGGC GTGAAGATGG GCGAGCTGCT CCAGACCGGC GAGCGCGTCG GTGCCGTGGG CGCCACCGGC CGCGTGACCG GGCCGCACCT GCACTGGGGC GTGATGCTGA ACCGGACGAT GGTGGACCCG GCGCTGTTTC TGGCGGCCTG A
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Protein sequence | MPIHHSALPQ RLLSRRSALL GSVGLLALPA SRLAAAAAPP SSEVWPNALQ VPGGIARLSL GPAAARPVAH AGDVPLLVLG DVIEWTALVG IPLSAAPGKA SITLQLEGGG QRQIAYTVAS KRYSEQRLKV APGTVDLSPE NEARYERERA HQATVMATFS TPLPDASSLR MQVPVPGRRS SSFGLRRVFN GQSRNPHSGM DIAASTGTPV VSPLPARVID TGDYFFNGKT VWLDHGGGLL SMVCHLSEIG VKMGELLQTG ERVGAVGATG RVTGPHLHWG VMLNRTMVDP ALFLAA
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