Gene Pnap_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1318 
Symbol 
ID4686312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1408548 
End bp1410494 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content68% 
IMG OID639834321 
Producthypothetical protein 
Protein accessionYP_981554 
Protein GI121604225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.181823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAT TAAATAGCCA GTCCCGCTGC CGCCCCTGGC TGGCTGCCGT GTTGCTGAGT 
GCCTTGGCCG CCGGATGCGG TGGCGGGCGT GATCCGATCC TGGGTTCAGG CGGCGCGACC
GTCGTCCCTC CGGCCGCTGT CCTTGTCGCG CCTGTGGTCA CCGCCGTGGC GCCCGCGCCG
GGTTCCACGG GCGTTGCGCT CAACAACACC TTGATCACCG CCGCCTTCAA CGAGCCGGTG
TCCATGACGG GCGCAGCCAG TTTTACGCTG AGCTGTGCCG CTCCCTGCGC AAGCCCTGCG
GGAGTCGTGG CACTGGATTC GACCCAGCAG CTTGCAACCC TTGCGCTGGC GCCGGCCACC
ACGCTGGCAG CGTCCACCAC CTACACGGCC ACGGTCAGCG GGGCGACCAG CCTGGCCAGC
GGCCTTGCAT TGGCCAGTCC CTATGTCTGG CGCTTCACCA CCGGCGCCAC AGCCGACACC
ACGCGGCCCC GGGTATCGTT CACGGTTCCC GCGACGGCAA ACCCCGGTCC TCTGACCGGC
GTGCCCGCCA ACACCGCCAT CAAAGCAGCC TTCACCGAGG CCATGGCCCC CGGCACCATC
ACGGCCGCCA GCTTTACCGT GACCTGTGCG GCGCCCTGCG TGTCACCCGC AGGCAGCGTG
AGCTATTCCC TGGCCAGCAA GACGGCCATC TTCCGGCCGG CCGCCGCGCT GGCCGTGGGC
GCGACCTATA CCGCCACCGT GACGGCTGCA GCGACCGACC TGGCGCGCAA CCAGCTGGCC
GGCAACCAGG CGCCATTGCC TGCGGCAAGC AACCATGTGT GGACATTCAC CACCGCCGCG
CCGGTTGCGC CCGCCAATGT CTCGGTGCTT TCCACCCAGC CTGCCGCCGG CGCCGCCAAC
GTCTGCACGA ACGCCAGCAT CAACGCCAGC TTCAGCGTGC CCTCCGGCTT TGAAATGGAC
CCGGCAACCG TCAATGCCGC CACCTTCACC GTGACCGGCC CGGCGCTGGC CCCCGTGGTG
GCGGCATCGG TGGTGCTGGA CGATGCCACG GGCCGCGTGG CGACCTTCAC GCCGCTTGCC
GCGCTGACCG CCGGGGTCAC GTATTCCGCC GTGGTCAAGG GCGGCGCCAC CGGCGTCAAG
GACCTGGCCA TTCCGGGCAA CCCGATGCTC GCCAGCCATG CCTGGAGCTT TACCGCCGTC
AATTGCACCG TGCCGCCGGT TCCATCGGCC ATCGTCCTTG GCGCGGCTGC ACCCTTTGCC
AGCTACGGCG GCACCGCCGG CATGACCAAC CAGGGCATTG ACACCGTCAT CAATGGCGAC
ATCGGCACCA CTGCCGTATC GACCGGCGTG ACCGGCTTTC AGGACACGGC TGGCAATGTG
TACACCGTGA CGCCGCTGAA CAAGGGCGTC GTGAACGGCA GCATCTACAC CTATCCGCCC
GCTCCCGGCA ATGCCGCCAC CAAAGTGATT GCCGATGCCG CCCTGGCCGC CGCGCAAGTG
GCCTACAACC AGCTGGTCGC CATGCCGCCG GGCGCTTATG CCGGCGCGGG CGAGCTGGGT
TTGCTGACCC TTGCCCCCGG CACCTACACC TCCGCCACTT CCTACCAGCT GACGCAGGGC
GACCTGACGC TGGATGCGCA AGGCGACCCG AATGCAGTCT TCGTCTTCCA GATGGGCAGT
TCGCTGACGG TGGGCATTGC CGGACCGACG GGCGCCCGCA GCATCGTGCT TAAAAACGGC
GCCCAGGCGA AAAATGTGTT CTGGCAGGTC GGTACATCGG CCACCATCAA TGCGGCGGGT
GGCGGTTTCA TGAAGGGAAC CATCATCGCC CAGCAGGCCG TGACCTTCTC GACCGCCGGC
AACGCCAAGC TCACGGTGCT CGACGGCCGG GCCTTGAGCC TGATCTCGGG CGTGACCATG
GTCAACACGC GCATCAACCT GCCCTGA
 
Protein sequence
MKPLNSQSRC RPWLAAVLLS ALAAGCGGGR DPILGSGGAT VVPPAAVLVA PVVTAVAPAP 
GSTGVALNNT LITAAFNEPV SMTGAASFTL SCAAPCASPA GVVALDSTQQ LATLALAPAT
TLAASTTYTA TVSGATSLAS GLALASPYVW RFTTGATADT TRPRVSFTVP ATANPGPLTG
VPANTAIKAA FTEAMAPGTI TAASFTVTCA APCVSPAGSV SYSLASKTAI FRPAAALAVG
ATYTATVTAA ATDLARNQLA GNQAPLPAAS NHVWTFTTAA PVAPANVSVL STQPAAGAAN
VCTNASINAS FSVPSGFEMD PATVNAATFT VTGPALAPVV AASVVLDDAT GRVATFTPLA
ALTAGVTYSA VVKGGATGVK DLAIPGNPML ASHAWSFTAV NCTVPPVPSA IVLGAAAPFA
SYGGTAGMTN QGIDTVINGD IGTTAVSTGV TGFQDTAGNV YTVTPLNKGV VNGSIYTYPP
APGNAATKVI ADAALAAAQV AYNQLVAMPP GAYAGAGELG LLTLAPGTYT SATSYQLTQG
DLTLDAQGDP NAVFVFQMGS SLTVGIAGPT GARSIVLKNG AQAKNVFWQV GTSATINAAG
GGFMKGTIIA QQAVTFSTAG NAKLTVLDGR ALSLISGVTM VNTRINLP