| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1300 |
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| Symbol | |
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| ID | 4686562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1390870 |
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| End bp | 1392276 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639834303 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_981536 |
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| Protein GI | 121604207 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.634439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCGTT TATTTTCATC GGCCCCGGCG TTCTCGCTGC TGTTTGCCGC GCTGCTGCTG
GCCGGCTGCG CGACCCGCAC GCCGCTCGAT ATGTCCAGCG TTCCGGCAAC GCCAAGCGCT
TTCAAGGAGC AAGCCAGTTC CGCCGCAGCG GCAACGCCTG CCTCGGGTGA AGCCGTCGGG
CAGGGCGCGT GGTGGAGCGT TTTTGCCGAT CCGGTGCTCA ATCAGCTGGT CGAGCAGGCA
AGCCGCAGCA ACAACAGCGT GCAGGTCGCT GCCGCACGGC TGCTGCAGGC GCGGGCGATT
GCGCGCCAGA CCGATGCCGG CCGCGCGCCG CAAGTCGGCC TGGGCGCCGG CGCCACGCGG
CAGACCAACG CCAGCACCGG CCATGTGCCC GCCACCGTGG TCAGCGCCGG TGCCAGCCTG
TCCTACGAGG TCGATCTGTT CGGCAAGCTG GCGGGCGCGT CGAATGCCGC CTCGCTCGAC
GCCGCCTCGC GCGAGGCGCT GCTGCGCAGC ACGCGCCTGC TGGTGCAGGC CGACGTGGCG
CAGACCTATT TGAGCCTGCG CGCGCTGGAC GCCGAGCGCG GGCTGGTCAA CAGCACGCTG
CAGGCCTACC GCAACACGCT GCGCCTGACC GAAGTGCGCT TTCGCGAAGG CGACGTGGCC
GAGCTGGACG TGGCCCGCGT GCGCAGCGAA GTCGCCTCCA CCGAGTCCGA TGCGCTGGCG
CTGGAGCGCC GCCGCGCCGA GCTTGAGCAC GCCGTGGCCG TGCTGATCGG CGAGGTCGCC
TCGACCTTCC AGATTGCGCC GGTCGAATGG GCCACGGCAC TGCCCGTGAT TCCGGCCGGC
GTGCCCAGCA GCGTGCTGGT TCGCCGGCCC GACATCGCCG CCGCGCAAAC CACGCTGCAG
GCGGCGCAGG CGCGCGTTGG CGTGGCCAAG ACGGCATGGT TTCCCAGCAT CTCGCTGACC
GCCACCGGCG GTTACGCCGC GCCTGAAGTG GGCGATCTGT TCAAGCTGTC GGCGCGCGCC
TGGGGCATAG GCGCGCTGCT GTCGCTGCCG ATTTTTGACG GCGGCCAGCG CGAAGCCGGT
GTGCAAAGCG CCAATGCCGA GCTCGACATC GCGCTGGCCA ATTACCGCGA ACAGGTGCTG
GTGGCCTTCC GCGACGTGGA AGACCAGCTG TCGGCCCTGC GGCTGCTGGC CGACCAGTCC
GAAGCCCAAT CGCGCTCGGT GGCATCGAGC AGCCGCGCCA CGCTGCTGTC GGATACCCGC
TACCGCAACG GTTTTGTCAG CCAGCTCGAA CTGCTCGACG CCCAGCGCAG CGAGCTGCGC
AACCGCCGCC AGGCGCTGCA GGTGAAAGCC GCGCAATACC TGTCAACGGT CGGGCTGATT
CGCGCATTGG GCGGCGGCTG GGCCTGA
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| Protein sequence | MNRLFSSAPA FSLLFAALLL AGCATRTPLD MSSVPATPSA FKEQASSAAA ATPASGEAVG
QGAWWSVFAD PVLNQLVEQA SRSNNSVQVA AARLLQARAI ARQTDAGRAP QVGLGAGATR
QTNASTGHVP ATVVSAGASL SYEVDLFGKL AGASNAASLD AASREALLRS TRLLVQADVA
QTYLSLRALD AERGLVNSTL QAYRNTLRLT EVRFREGDVA ELDVARVRSE VASTESDALA
LERRRAELEH AVAVLIGEVA STFQIAPVEW ATALPVIPAG VPSSVLVRRP DIAAAQTTLQ
AAQARVGVAK TAWFPSISLT ATGGYAAPEV GDLFKLSARA WGIGALLSLP IFDGGQREAG
VQSANAELDI ALANYREQVL VAFRDVEDQL SALRLLADQS EAQSRSVASS SRATLLSDTR
YRNGFVSQLE LLDAQRSELR NRRQALQVKA AQYLSTVGLI RALGGGWA
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