Gene Pnap_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1272 
Symbol 
ID4687512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1363756 
End bp1364193 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content62% 
IMG OID639834275 
ProductUspA domain-containing protein 
Protein accessionYP_981508 
Protein GI121604179 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC ACATTCTGGT TCCCGTTGAC GGATCGCTCA CGGCGCGCCA TGCCATCGAC 
AAGGCCGTGG CCATTGCCGT GGCGTTCCAA AGCGCGGTGA CGGTGATTTA TGTCATCGAC
CCCTATGCCT TCTCTGGCGT GGGCGCCGAC TTTTCCTATG GCCAGGCCGA ATACCTGAGC
GCCGCCACGG CGGAAGCCGA TCAAGCCATC AGCGCCGCCC GGCAGGTTTT CGGGGCGAAC
GGGCTGGTCA TCCAGGGCTC TGTCGTCGAA GGACATTCGG TGTACCAGGC TATTTTGGAT
GCCGCCGAGT CCATCAATGC CGACTTGATC GTCATGGGTT CGCACGGCCG CCGGGGGCTT
GAAAAACTGG TGCTTGGCAG CGTCACGGCC CAGGTGTTGT CGCATGCCCA TCTGTCGGTG
CTGGTGGTGC GCGAGTAG
 
Protein sequence
MFKHILVPVD GSLTARHAID KAVAIAVAFQ SAVTVIYVID PYAFSGVGAD FSYGQAEYLS 
AATAEADQAI SAARQVFGAN GLVIQGSVVE GHSVYQAILD AAESINADLI VMGSHGRRGL
EKLVLGSVTA QVLSHAHLSV LVVRE