Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1272 |
Symbol | |
ID | 4687512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1363756 |
End bp | 1364193 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639834275 |
Product | UspA domain-containing protein |
Protein accession | YP_981508 |
Protein GI | 121604179 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAGC ACATTCTGGT TCCCGTTGAC GGATCGCTCA CGGCGCGCCA TGCCATCGAC AAGGCCGTGG CCATTGCCGT GGCGTTCCAA AGCGCGGTGA CGGTGATTTA TGTCATCGAC CCCTATGCCT TCTCTGGCGT GGGCGCCGAC TTTTCCTATG GCCAGGCCGA ATACCTGAGC GCCGCCACGG CGGAAGCCGA TCAAGCCATC AGCGCCGCCC GGCAGGTTTT CGGGGCGAAC GGGCTGGTCA TCCAGGGCTC TGTCGTCGAA GGACATTCGG TGTACCAGGC TATTTTGGAT GCCGCCGAGT CCATCAATGC CGACTTGATC GTCATGGGTT CGCACGGCCG CCGGGGGCTT GAAAAACTGG TGCTTGGCAG CGTCACGGCC CAGGTGTTGT CGCATGCCCA TCTGTCGGTG CTGGTGGTGC GCGAGTAG
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Protein sequence | MFKHILVPVD GSLTARHAID KAVAIAVAFQ SAVTVIYVID PYAFSGVGAD FSYGQAEYLS AATAEADQAI SAARQVFGAN GLVIQGSVVE GHSVYQAILD AAESINADLI VMGSHGRRGL EKLVLGSVTA QVLSHAHLSV LVVRE
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