Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1260 |
Symbol | |
ID | 4689711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1353695 |
End bp | 1354513 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639834263 |
Product | blue (type1) copper domain-containing protein |
Protein accession | YP_981496 |
Protein GI | 121604167 |
COG category | [P] Inorganic ion transport and metabolism [S] Function unknown |
COG ID | [COG4454] Uncharacterized copper-binding protein [COG5569] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0922125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA CTCTCAAAAC CATAGCTGCT TGCGCACTGC TGGCATGCGC AACAGCCACT TTTGCCGCAG GAAACCACGC TGGCGGGCAT GACCACGGCC CCGCAAAGGC GCAAAGCATT GGCGAAGCCG GCGTGGCCGC CAACGTCACC CGCACCGTCG AGGTGGACAT GAGCGACGCG ATGCGCTTTA CCCCCGCCGC CATTCAAGCC AAGCAGGGCG AGACGATCCG ATTCGTGGTG AAAAACAGCG GCCAGCTCAG CCACGAGTTC GTCCTCGGCA CGGAAAAAGA CCTCAAGGCG CACTACGAAG TGATGAAAAA GAGCCCGCAC ATGGAGCACG CGGACGACAA CATGCTGACC GTGGCGCCCG GCCAGAGCGG CGAGTTGCTG TGGCGCTTCA CCCAGGCGGG GAAAGTTGAC TTTGCCTGCC TGCATCCGGG CCACTATGAC GCCGGCATGA AAGGCGCGGT GGCCGTGGCC TCCAGCGGCC AGCCCGCCAA GCCCGCCATG GGCATGAGCG GCATGAGCGG CACGAGCGAC ATGACCAAGG TCAACGACGT GAACAGCCCG GCCCCGAAAA TGGACATGAA GGGCATGGAG ATGAGCAGCG GCGAGGTGAA GAAAATTGAC AAGCAAGCGC AAAAAATTAC CCTCAAGCAC GGCCCCATCA AAAACCTGGA CATGCCGGGC ATGACGATGG TGTTCAAAGT CGCGGACCCG TCCTTGCTGG ACAAGGTCAA GGCCGGCGAC ACGGTGAAAT TCACCGCTGA AGACCAGGGC GGCGCCATGG TCGTCACGGC GATTGAAGCC GTCAAATAA
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Protein sequence | MKTTLKTIAA CALLACATAT FAAGNHAGGH DHGPAKAQSI GEAGVAANVT RTVEVDMSDA MRFTPAAIQA KQGETIRFVV KNSGQLSHEF VLGTEKDLKA HYEVMKKSPH MEHADDNMLT VAPGQSGELL WRFTQAGKVD FACLHPGHYD AGMKGAVAVA SSGQPAKPAM GMSGMSGTSD MTKVNDVNSP APKMDMKGME MSSGEVKKID KQAQKITLKH GPIKNLDMPG MTMVFKVADP SLLDKVKAGD TVKFTAEDQG GAMVVTAIEA VK
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