Gene Pnap_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1221 
Symbol 
ID4688804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1310706 
End bp1311527 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content65% 
IMG OID639834224 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_981457 
Protein GI121604128 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.212556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0915283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTA TTTCTCTGGC CGGCTCTTTG GCCGACATTT CGCCGCCGGT GCTCCATACC 
CGTGACGAGC GCGGCGTTCA CCGCCTGGTG CTCAACCGGC CGGCCACCTT CAACGCCCTG
AGCGAGGAAA TGCTGGCCGC GCTGCAAACC GCGCTTGATG CGATTGCGCT GGACGAATCG
GCCCGCATCG TGGTGCTGTC GGCGCAAGGC AAGGCGTTTT GCGCCGGCCA CAACCTCAAG
GAAATGCGCG CCCAGCCCGG GCTGGCCTAT TACCAGAAGC TGTTTGCCCA ATGCACCCGC
ATGATGCTCA GCATCCAGAA CCTGCCGGTG CCGGTGATTG CCAGGGTGCA AGGGCTGGCG
ACCGCTGCGG GTTGCCAGCT GGTGGCGCAA AGCGACCTGG CGGTGGCCGC CAGCCAGGTC
AGCTTTGGCG TCAACGGCAT TGATGTCGGC CTGTTCTGCG CCACGCCCAG CGTGCCGCTG
GTGCGCAACA TGCCGGCCAA GCAAGCCATG GAAATGCTGC TGACCGGCGA GTTCATCACC
GCCGACGAGG CGCGCGCCCG GGGCCTGGTC AACCGCGTCG TGCCGCTCGA AGCGCTCGAC
GCCGAGGTTG AAAAGCTGGT CCAGGCGATA TTGTCCAAAC CGCACGAGGC GGTCGCCATG
GGCAAGGCGC TGTTCTACAA GCAGCGTGAA ACCGGCGTCG AAGCCGCCTA CCAACTGGCC
GGCCAGATCA TGGCCTGCAA CATGATGCAC CCCGTGGCGC AAGAAGGCGT GCAGGCCTTT
ATCGACAAGA GAAAGCCGCA ATGGCCAGTG CCGACGCCGT GA
 
Protein sequence
MSVISLAGSL ADISPPVLHT RDERGVHRLV LNRPATFNAL SEEMLAALQT ALDAIALDES 
ARIVVLSAQG KAFCAGHNLK EMRAQPGLAY YQKLFAQCTR MMLSIQNLPV PVIARVQGLA
TAAGCQLVAQ SDLAVAASQV SFGVNGIDVG LFCATPSVPL VRNMPAKQAM EMLLTGEFIT
ADEARARGLV NRVVPLEALD AEVEKLVQAI LSKPHEAVAM GKALFYKQRE TGVEAAYQLA
GQIMACNMMH PVAQEGVQAF IDKRKPQWPV PTP