| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1129 |
|---|
| Symbol | |
|---|
| ID | 4688071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1201883 |
|---|
| End bp | 1202578 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639834133 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_981366 |
|---|
| Protein GI | 121604037 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAACA CCCCCTCCTC CAACGACAAC ACTCCAGCCA CCGCCACCAG GCGCGAGCGC
CGCAAGGAAG CCCGTCCGGG CGAATTGATC GACGCGGCGC TCAACCTTTT TGTTGAAAAA
GGCTTTGCCG CCACCCGCGT CGAGGAAGTC GCGGCGCGCG CCGGCGTGTC CAAGGGCACG
CTGTTTTTGT ACTTTCCCAG CAAGGACGAG CTGTTCAAGG CCGTGGTGCG TGAAAACATC
TCGGGCCGGT TTGTCGAGTG GAACAGCGAG TTCGAGGGCT TCGAGGGCAG CACCGGCGAC
ATGCTGGGCT ACTGCATGAA TTCCTGGTGG GAGCGGGTCG GCGCGACAAA AGCCTCGGGG
CTGGCCAAGC TGATGATGAG CGAAGCCGGC AATTTTCCGG AAATCTCCGC CTTCTATCAG
CAAGAAGTCA TCCAGCCCGG CCATACGCTG ATTCGCCGCA TTTTGCAGCG CGGCATGGAT
CGCGGTGAAT TTCGCAGCCT GGACCTGGAC TATGCGGTGT ACAGCGTGGT GGCGCCGATG
ATGTTCATGA TCCTGTCCCG GCACTCGATG GGCGTTTGCG TTCCGAACAA TGTCGAGCTG
GACCCCAAAA GATACATTGC CTCGCAGTTG GGCGTCATCC TGAACGGCTT GGGCCTTCGG
CCCGGCGATG CCCGGCCAGA TGCAAGGAAG GCCTGA
|
|---|
| Protein sequence | MPNTPSSNDN TPATATRRER RKEARPGELI DAALNLFVEK GFAATRVEEV AARAGVSKGT
LFLYFPSKDE LFKAVVRENI SGRFVEWNSE FEGFEGSTGD MLGYCMNSWW ERVGATKASG
LAKLMMSEAG NFPEISAFYQ QEVIQPGHTL IRRILQRGMD RGEFRSLDLD YAVYSVVAPM
MFMILSRHSM GVCVPNNVEL DPKRYIASQL GVILNGLGLR PGDARPDARK A
|
|---|
| |