Gene Pnap_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1052 
Symbol 
ID4688874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1112279 
End bp1112647 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content62% 
IMG OID639834051 
ProductTraR/DksA family transcriptional regulator 
Protein accessionYP_981290 
Protein GI121603961 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.129097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCAC AACAAGCGAC GCCCTATCGC CAGCAATTGC TGGAAATGCG CACGTCCCTC 
CTTGCGCAAA TGAGCGAGCA GCGTGGAGGC ACGCTGGGCC GTGCGCAAGC TGCCGCAGAG
CATTTTGAAC GCCGCGAGGA TTCCAGCGCG CAAGTGGCCA CCGAGCGCGA GTTGGAGTTC
GCCATCGGCG AGCGTGAAAC CAATGAACTG GCCATGATCG ACGCAGCCCT GGCGCGCATT
GAAGCCGGCA CTTACGGCGA ATGCATCGAT TGCGGCACCG ACATCACGGC GCAACGACTG
CAGGCCAGCC CCGAAGTGTC GCGCTGCATT TCCTGCCAGG TAAAAGCGGA ACAGCACCGT
TCGGCCTGA
 
Protein sequence
MTPQQATPYR QQLLEMRTSL LAQMSEQRGG TLGRAQAAAE HFERREDSSA QVATERELEF 
AIGERETNEL AMIDAALARI EAGTYGECID CGTDITAQRL QASPEVSRCI SCQVKAEQHR
SA