| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1014 |
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| Symbol | |
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| ID | 4686425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1071690 |
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| End bp | 1072802 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639834013 |
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| Product | putative substrate-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | YP_981252 |
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| Protein GI | 121603923 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0676014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCC TGGCCGTTGG CGGCGTCATG GCTGCCGCGC TGTCGGCGGG CGCTGCCCCG
ATTGTCGTGG GGCAGGTTGC ACCCTTGAGC GGTATGGAGG CGCGTCAGGG GCGAGCTTAT
TCAATCGGTA TCCGGCTGGC CCTGAACAAG GCCAACACGG CGGGCGGGGT GAATGGCAAC
ACCTTCAGCC TGGTGAGCAA GGACGATGGC GGCCGGTCTG ACGACACCCT GGCGGCCACC
CGGCTGCTGC TGAGCGAGAG CCGCCCCCTG GTGCTGGCGG GTTATTTTGG CGACCGCAGC
ATGGCTGATC TGGCCGGCTC GGGCCTGCTT GGAAAAGAGA AAATCGCCCT GGTTGGTTAC
CGCGTCAATG AGATTCGGGA AGAGGCGCCG CTGATCTACA GCGTTCGCGC CACCTTGCGT
GACGAAATCA ACAAGATCGT CGAGCATCTG GCCACCGTGG GCATCACGCG CCTGGGACTG
TTTTACCCGG ATGGACCCGG TGCGGCACCG CTGATTGCGG CCATGGAAGA CGTGGCGAAG
AAGAAGAATG TCAAACTTCT GGTCAAGGGG TCTTATAAAC CGGACTCGGC CAAGGTGGCC
GGTGCGGTCA TCGATGCGTT TATCGCGGCC GCGCCGCAGG CGATCATCAT TGCATCCAGT
GGCTCGGCGG CAGCGGACTT TATTGAAAAA TACCGGATGA ATGGAGGCGC GGCCCAATTG
TTTGCCCATT CCGGCGCAGA CATCGAGCAC ATCTCCCAGC GCCTGGGCGA AGAGCACATG
AAAGGCATGG CGATTGCACA GGTCACGCCG AATCCGTACA AGATTTCAGG GCTTCTGAGC
AAGGAATTCA TCGACACGGC GGCCAAAACA CCGGACTTGG GCATGCCTGT GAGCTACGCC
ATGATGGAAG GCTATATTGC CGGGTCCGTG ATCGTGGAGG CGGCGCGGCG CATGGGACCC
AAGGTGTCGC GCGAGGGCTT CGTGTCGGCG CTTGAGAGCA TCGACAACCT GGACATGGGC
GGCTACAAGC TGGGCTTCAA GCCGGGCATG CGCTCAGGCT CGAAGTTTGT CGAACTGACC
ATCGTCACTG CCACGGGGCG CATCCGGCAA TAA
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| Protein sequence | MRTLAVGGVM AAALSAGAAP IVVGQVAPLS GMEARQGRAY SIGIRLALNK ANTAGGVNGN
TFSLVSKDDG GRSDDTLAAT RLLLSESRPL VLAGYFGDRS MADLAGSGLL GKEKIALVGY
RVNEIREEAP LIYSVRATLR DEINKIVEHL ATVGITRLGL FYPDGPGAAP LIAAMEDVAK
KKNVKLLVKG SYKPDSAKVA GAVIDAFIAA APQAIIIASS GSAAADFIEK YRMNGGAAQL
FAHSGADIEH ISQRLGEEHM KGMAIAQVTP NPYKISGLLS KEFIDTAAKT PDLGMPVSYA
MMEGYIAGSV IVEAARRMGP KVSREGFVSA LESIDNLDMG GYKLGFKPGM RSGSKFVELT
IVTATGRIRQ
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