Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1005 |
Symbol | |
ID | 4686729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1057546 |
End bp | 1060134 |
Gene Length | 2589 bp |
Protein Length | 862 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639834004 |
Product | cyanophycin synthetase |
Protein accession | YP_981243 |
Protein GI | 121603914 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02068] cyanophycin synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.623044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTTT CACGTATCCG GGCCCTGCGC GGCCCCAATC TCTGGAGCCG CCGCACGGCC CTTGAAGCCA TCGTCGCCTG CAGCCCCGCC GAATGCTCGG TGGACAACCT GGCCGGGTTC GAGCCGCGCC TGCGGGCCTT GTTTCCAGGC ATCGGCGTCC TGCGCGAGAC CGGCCCCGCC GGTCCGGTGT CGCTGGCGCA TGTGCTGGAA GCAGCCGCGC TGGAGCTGCA GGCCGCAGCT GGCTGTCCGG TCACCTTCAG CCGCACCTCG GCCACGCTGG AGCCGGGCAC CTACCAGGTC GTGGTCGAGT ACAGCGAAGA AGCGGTGGGC CGCCTGGCGT TTGAGCTGGC GCAGGCGCTG GTGCATGCAG CCCTGCAGGA CGCGCCTTTT GAGCTGCAGG CCGCCATTGC CCGCCTGCGC GACCTCGATG AAGACGAGCG CATGGGTCCG AGTACCGGCG CGATTGTCGA TGCCGCCGTG GCGCGCGGCA TTCCCTACCG GCGCCTGACC AAGGGCAGCA TGGTGCAGTT TGGCTGGGGC TCGCGCCAGC GCCGCATCCA GGCGGCCGAA CTCGACAGCA CCAGCGCCGT GGCCGAATCG ATTGCGCAGG ACAAGGACCT GACCAAGAAG TTGCTGCGCG CCGCCGGCGT TCCGGTGCCG CTGGGCCGTC CGGCCAGCGA CCCGGACGAC GCCTGGGCAG CGGCGCTGGA GGTCGGCCTG CCGGTCGTGG TCAAGCCGCA GGACGGCAAC CAGGGCAAGG GCGTGACCGT CAACATCATG ACGCGCGAGC AGCTTGACAG CGCCTGGCGC GCGGCCGCCG AACATGGCGA AGTCATGGTT GAACGGTTTC TGCCGGGCTG CGACTTTCGC CTGCTGGTGG TCGGAGCCAA GCTGGTCGCC GCTTCCCGGC GCGAGCCGCC GCAGGTCGTC GGCGACGGCG TGCACACGGT GCGCGAGCTG GTCGAGATCG TCAACCAGGA CCCCCGGCGC GGCGAAGGCC ATGCCACGTC GCTGACCAAG ATACGGTTTG ACGACATCGC TGTCGCCCGG CTCGATGCCC AGGGCTTGAG CCCCGCGTCG GTTCCGGCCA AGGGCAAGCG CGTCATTTTG CGCAACAACG CCAACCTGAG CACCGGCGGC ACCGCCACCG ACGTGACCGA CGAAGTGCAT CCGGCCATCG CCGCCCGCGC CGTGGCGGCC GCGCAGATGA TCGGCCTGGA CATTTGCGGC GTCGATGTGG TGTGCGAAAG CATGCTGCGC CCGCTGGAGG CGCAAAACGG CGGCGTGGTC GAGGTCAATG CCGCGCCCGG CCTGCGCATG CACCTGTCGC CTTCCTACGG CAAGGGCCGC GCCGTCGGCG TCGCCATGAT TGACGAGCTT TTCCCTGCCG GTGAAAACGG CCGCATTCCC GTGATTGCCG TCACCGGCAC CAACGGCAAG ACCACCACCA CCCGGCTGAT CGCCCACCTG CTGGCCGCGC ACGGCCTGCG CACCGGCATG ACGAATACCG ACGGCGTCTA TATCAACGGC CGGCAGACCG ACAGCGGCGA CTGCAGCGGC CCGAAAAGCG CGCGCAACGT GCTGATGCAC CCGGACGTGG ACGCGGCGGT GTTCGAGGTC GCGCGCGGCG GCGTGCTGCG CGAAGGCCTG GGCTTTGACC GCTGCGAAGT CGCCGTGGTG ACCAACATCG GCAGCGGCGA CCACCTCGGG CTGAACTACA TCACCACGGT CGAAGACCTG GCGGTGCTCA AACGCGTGAT CGTGCAGAAC GTCGCGCCCA CGGGTTACGC GGTGCTCAAT GCGGCCGACG CCATCGTCAC CGAGATGGCC CAGGCCTGCC CCGGCAAGGT GATCTTTTTC GGCGCCGACC GCCATCACCC GCTGATGGCC ACGCACCGCG CGCAGGGCAA GCGCACGGTG TTTGTCGATG GGCCAATGCT GGTGGCCGCC GAAGGCTCGC GCGTCGAGCG CATCGCGCTG TCGGGCATTC CGGTCACGCG GGCGGGAAGC ATCGGCTTTC AGGTCGAAAA CGTGATGGCG GCCGTGGCGG CGGCCTGGGC CGTCAACGTC AGCTGGGACA CCATCAAGAG CGGCCTGGCC AGCTTCGCCT GCGACACGCA CAACGCACCC GGCCGCTTCA ACGTGATGGA CTATGGCGGC GCCACCGTGA TTGCCGACTA CGGCCACAAC CCCGACGCCA TGCTGGCGCT GGTCGCCGCC GTCAATGCCA TGCCAGCGCA GCGCCGCAGC GTGGTCATCA GCGGCGCGGG CGACCGGCGC GACAGCGACA TCACCAACCA GACGGTGATT CTGGGTGCCG CGTTCGACGA CGTGATCCTG TACCAGGACG CTGCCCAGCG CGGCCGGGCC GATGGCGAAG TGATGGCGCT GCTGCGCGAA GGCCTGAAAG GCGCCAGCCG CACGCAGCGG ATTGACGAGA TACGCGGCGA GTTCGTGGCC ATCGACACGG CGCTGGCGCG CCTGCAGCCC GGCGACCTGT GCCTGGTCCT GGTCGATCAG GTGCAGGAGG CGCTGGACCA CCTGGCGCTG CGCATCAGGG AAGCGCGGGA AAAGCTGATG CCAGCCTGA
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Protein sequence | MEVSRIRALR GPNLWSRRTA LEAIVACSPA ECSVDNLAGF EPRLRALFPG IGVLRETGPA GPVSLAHVLE AAALELQAAA GCPVTFSRTS ATLEPGTYQV VVEYSEEAVG RLAFELAQAL VHAALQDAPF ELQAAIARLR DLDEDERMGP STGAIVDAAV ARGIPYRRLT KGSMVQFGWG SRQRRIQAAE LDSTSAVAES IAQDKDLTKK LLRAAGVPVP LGRPASDPDD AWAAALEVGL PVVVKPQDGN QGKGVTVNIM TREQLDSAWR AAAEHGEVMV ERFLPGCDFR LLVVGAKLVA ASRREPPQVV GDGVHTVREL VEIVNQDPRR GEGHATSLTK IRFDDIAVAR LDAQGLSPAS VPAKGKRVIL RNNANLSTGG TATDVTDEVH PAIAARAVAA AQMIGLDICG VDVVCESMLR PLEAQNGGVV EVNAAPGLRM HLSPSYGKGR AVGVAMIDEL FPAGENGRIP VIAVTGTNGK TTTTRLIAHL LAAHGLRTGM TNTDGVYING RQTDSGDCSG PKSARNVLMH PDVDAAVFEV ARGGVLREGL GFDRCEVAVV TNIGSGDHLG LNYITTVEDL AVLKRVIVQN VAPTGYAVLN AADAIVTEMA QACPGKVIFF GADRHHPLMA THRAQGKRTV FVDGPMLVAA EGSRVERIAL SGIPVTRAGS IGFQVENVMA AVAAAWAVNV SWDTIKSGLA SFACDTHNAP GRFNVMDYGG ATVIADYGHN PDAMLALVAA VNAMPAQRRS VVISGAGDRR DSDITNQTVI LGAAFDDVIL YQDAAQRGRA DGEVMALLRE GLKGASRTQR IDEIRGEFVA IDTALARLQP GDLCLVLVDQ VQEALDHLAL RIREAREKLM PA
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