| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0888 |
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| Symbol | |
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| ID | 4688587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 940120 |
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| End bp | 940752 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639833884 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_981126 |
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| Protein GI | 121603797 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.147718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC ACTTGCTGAT GCAACCCGGC CGCCGGCGTG CCTTCAACAC CCTGGCGGCC
TTGATGGCGC TGTCGATGTC TGCCGGAGTC CTGACGGGCT GCGCGCCCGA CAAGCCCCAG
TTCAAGAGCA TTGACCTGAC CGGCGCCGAC TATGCGCAGG GCTTTTCCCT GGCTGACCAC
AACGGGCAGT TGCGCACGCT CAAGGACTTT GCCGGCAAGG TCGTGGTCGT GTTTTTCGGC
TTTACCCAGT GTCCCGATGT CTGCCCGACC TCCATGGCCG AACTGGCCGA AATCAAAAAG
CAGCTTGGCG CCGATGGCGA CAAGCTGCAG GCCATCTTCA TCACCGTGGA CCCCGAGCGC
GACACGCCCG AGATGCTCAA GGCCTACATG GGCAACTTCG ACCCGACCTT CGTGGCACTG
CGGCCCACGC CGGAGCAACT TGCGCAAGTC GCCAGGGATT TCAAGATTTA TTACAAAAAA
GTCGATGGCA AGACCCAAGG CAGCTACACC ATGGACCATT CGGCCGGCAG CTACATCTTT
GACCCGCAAG GCCGTGTCCG GCTCTACAGC CGCTACGGTT CGGGTGCTGA AGCGCTGGCT
TCCGACATTC GCCTGCTGAT CAAGTCAAGC TGA
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| Protein sequence | MKTHLLMQPG RRRAFNTLAA LMALSMSAGV LTGCAPDKPQ FKSIDLTGAD YAQGFSLADH
NGQLRTLKDF AGKVVVVFFG FTQCPDVCPT SMAELAEIKK QLGADGDKLQ AIFITVDPER
DTPEMLKAYM GNFDPTFVAL RPTPEQLAQV ARDFKIYYKK VDGKTQGSYT MDHSAGSYIF
DPQGRVRLYS RYGSGAEALA SDIRLLIKSS
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