Gene Pnap_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0833 
Symbol 
ID4687338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp881444 
End bp882058 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID639833828 
Productcytoplasmic chaperone TorD family protein 
Protein accessionYP_981071 
Protein GI121603742 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCC AACTCACAGC CTCCACCCTG GACGAAGAAA CCGCGCGCGC CGAGGTGTAC 
GGATTGCTGG CCGCGCTGCT CTATACAGCG CCCAGCGCCG ATCTGTACGA CCGGCTGCGC
GTCGCCGTCA CCCAGGCCCC GGCCGCCGGC GCCCTGCTTG AAAGCCCGTG GGGCGAACTG
GTCGCCAGCG CGCGAGAACA GTCGCTGGCC GCTACCCGCA GCGAATACGA CGCTCTGTTC
GGCGGCGTGG GCAAGCCCGA GGTCTATCTG TTCGGCTCCC ACTACCTCAG CGGATTCCTC
AATGAAAAAC CGCTGGCGGC CCTGCGCGCC GACCTGGCGG CGCTCGGCCT GGCGCGCGAC
GAGGCCATGC TTGATACCGA AGACCATGCG GCCTATATTT GCGAAGTCAT GCGCTACCTG
ATCGCCGGCG ACGATGTGGA AGTAGCCAAC CTGACGCGCC AGCGCGAGTT CTTCACGCGC
CATGTCCAGC CCTGGTTTCC CATGCTGTGC GAGGCCGTCA TGCAGCATCC GAAGGCGCGC
TTCTATCGGG CCGTTGCGGC CTTCGCGCAA GCCTTCACCG GCGTCGAAGC GCAAGGTTTC
GACATGCTGG ACTGA
 
Protein sequence
MQAQLTASTL DEETARAEVY GLLAALLYTA PSADLYDRLR VAVTQAPAAG ALLESPWGEL 
VASAREQSLA ATRSEYDALF GGVGKPEVYL FGSHYLSGFL NEKPLAALRA DLAALGLARD
EAMLDTEDHA AYICEVMRYL IAGDDVEVAN LTRQREFFTR HVQPWFPMLC EAVMQHPKAR
FYRAVAAFAQ AFTGVEAQGF DMLD