Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0819 |
Symbol | |
ID | 4686351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 863303 |
End bp | 865672 |
Gene Length | 2370 bp |
Protein Length | 789 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639833816 |
Product | ATP-dependent protease La |
Protein accession | YP_981059 |
Protein GI | 121603730 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.433803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCCA AAGATGCCAA GTCGCCCGCG CTTCCCGACG GCGTGATCGC CCTCGTGCCG ATGCGCAATG TCGTGCTGTT TCCGAACACG CTGGTGCCCA TCACCGTCGG CCGCCCCAAG TCGATTGCGG CGGTCCAGCA TGCCAAGAAC ACCGGCGACC TGCTGGGCAT CGTGATGCAG CGCGACGAAA AGGACGATGA CCCGGGGCGG GACGCGCTGT GCGACGTCGG GACCACCGCC AAGGTGGTGC AGCAGGTCGG CTCGGACGAG CAGCTGCGCC ACGCCCTGTG CCAGGGCGTG CAACGCTTTC GCATTCAATC CATGGTCGAG GGCTATCCCT TCCTGGCCGC CCGCGTGCGC CTGATCGACG AGCCGGCCGA GCCTTCGACG CAGGCCGAGG CGCTGGGCCT GCAGCTGCGC GAGCGGGCCG CCGAAATCCT CTCGCTGCTG CCGGGGGCGC CGGCCGAGCT GGCGCATACG CTGCAGGCCG TGCGCTCGCC CTCGCACATG GCCGATGTCG TCGCCAGCCT GCTCGATGCC GAATTGAGCG AAAAGCAGAT GCTGCTGGAA ACCGCCAACA CCGAGGAGCG GCTGCAAAAA GTGCTGCAGA TGCTCACGCA CCGCATCGAG GTGCTGCGGC TGTCGCAGGA AATCGGCGAG CGTACCAAGG AGCAGATTGA CGACACCCAG CGTAAATACA TGCTGCGCCA GCAACTCAAG ACCATCCAGA AGGAACTGGG CGAGGACGAC GGCACCAGCG AGGACATTGC CCAGCTCGGC GAGCTGATCG CCAAGGCGGG CATGCCGGCC GACGTGGAGG CCCAGGCGCG CAAGGAGCTT TCACGCCTGC AGCGCATGCC GGACGCTTCC AGCGAATACT CGATGCTGCG CACCTACCTG GAGTGGATGA CCGAGCTGCC GTGGACCGTG CCGCAAGCCA GCCCGATTGA CCTGACCGAG GCGCGTCGCA TCCTGGAGGC TGACCACTAC GGGCTGGAGC GCATCAAGCA GCGCATCGTC GAATACCTGG CGGTGCAAAA GCTCAACCCC GGGGGGCGGG CGCCGATTCT GTGCTTTGTC GGGCCGCCGG GCGTGGGCAA GACCTCGCTG GGCCAGAGCA TCGCGCATGC GCTGGGCCGG CCGTTCGTGC GGGTTTCGCT GGGCGGCGTG CATGACGAGG CCGAGATTCG CGGCCACCGC CGCACCTATA TCGGCGCGAT GCCCGGCATG ATCGTGCAAA ACCTGCGCAA GGCCGGCGCG CGCCACTGCG TGATGATGCT CGACGAGATC GACAAGCTCT CGCCCAGCGC CCACGGCGAC CCGTCGGCCG CGCTGCTCGA AGTGCTGGAC CCGGAGCAGA ACTCGACCTT CCGGGACAAC TACCTGGGCG TGCCCTTCGA CCTGAGCCGG GTGGTCTTCG TGGCGACCGC CAATGTCATC GACCAGGTGC CCGCCCCGGT GCGCGACCGC ATGGAAGTCA TTGAACTGCC GGGCTACACG CAGGAAGAAA AGCTGCAGAT TGCCCAGCGC TACCTGGTGG GGCGCCAGCG CGAGGCCAAC GGCCTGCGCG GCGAGCAGTG CGAACTGACC CTCCAAGCCC TGCAGGCGCT GATTGCCGAC TACACCCGGG AGGCGGGCGT GCGCCAGTTG GAGCGCGAGA TCGGCCGCGT CATGCGGCAT GCCGCCGTGC AGATCGCCGA CGGCTCGAAG CCCCAGGTGC GCGTCGATGC GGCCGACCTG GACGCGATCC TCGGCCCGGC CAGGTTCGAG CATGAAACCG CCTTGCGCAG CAGTATGCCG GGCGTGGCGA CCGGGCTGGC CTGGACACCC GTGGGCGGCG ACATCCTGTT CATCGAGGCG ACGCGCGTGG CCGGCACCGG CCGGCTGATC CTGACCGGCC AGCTCGGCGA GGTGATGAAG GAAAGCGCCC AGGCCGCGCT GACGCTGGTG AAGGGGTTTG CCAGCACCCT GCGCGTTCCG GCGGAACGCT TCGAAGGCAT TGATGTGCAT GTGCATGTGC CGGCCGGCGC GATTCCGAAG GACGGGCCGA GCGCCGGCGT GGCCATGTTC ATTGCGCTGG CCTCGCTGTT CACCGACCAG GCGGTGCACC ACGACGTCGC CATGACCGGT GAAATCAGCC TGCGCGGACT GGTGCTGCCG GTGGGCGGAA TCAAGGAAAA GGTGCTGGCC GCGCAGCGCG CCGGCGTGCA GACCGTGCTG CTGCCCCGGC GCAACGAGAA AGACCTGCGC GACGTGCCCG AATCCACGCG CGAGGCCCTG AAGTTCGTCT GGCTCGACCA TGTCGATGAC GCCATTCGCG CGGCGCTGGG CGATGTGGCG ATGCGCGGCG AGGGCTTCGT GCTGGTGTGA
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Protein sequence | MDAKDAKSPA LPDGVIALVP MRNVVLFPNT LVPITVGRPK SIAAVQHAKN TGDLLGIVMQ RDEKDDDPGR DALCDVGTTA KVVQQVGSDE QLRHALCQGV QRFRIQSMVE GYPFLAARVR LIDEPAEPST QAEALGLQLR ERAAEILSLL PGAPAELAHT LQAVRSPSHM ADVVASLLDA ELSEKQMLLE TANTEERLQK VLQMLTHRIE VLRLSQEIGE RTKEQIDDTQ RKYMLRQQLK TIQKELGEDD GTSEDIAQLG ELIAKAGMPA DVEAQARKEL SRLQRMPDAS SEYSMLRTYL EWMTELPWTV PQASPIDLTE ARRILEADHY GLERIKQRIV EYLAVQKLNP GGRAPILCFV GPPGVGKTSL GQSIAHALGR PFVRVSLGGV HDEAEIRGHR RTYIGAMPGM IVQNLRKAGA RHCVMMLDEI DKLSPSAHGD PSAALLEVLD PEQNSTFRDN YLGVPFDLSR VVFVATANVI DQVPAPVRDR MEVIELPGYT QEEKLQIAQR YLVGRQREAN GLRGEQCELT LQALQALIAD YTREAGVRQL EREIGRVMRH AAVQIADGSK PQVRVDAADL DAILGPARFE HETALRSSMP GVATGLAWTP VGGDILFIEA TRVAGTGRLI LTGQLGEVMK ESAQAALTLV KGFASTLRVP AERFEGIDVH VHVPAGAIPK DGPSAGVAMF IALASLFTDQ AVHHDVAMTG EISLRGLVLP VGGIKEKVLA AQRAGVQTVL LPRRNEKDLR DVPESTREAL KFVWLDHVDD AIRAALGDVA MRGEGFVLV
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