Gene Pnap_0760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0760 
Symbol 
ID4689929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp805178 
End bp806209 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content66% 
IMG OID639833756 
Productgeneral secretion pathway protein K 
Protein accessionYP_981000 
Protein GI121603671 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.749309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.204682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTGA GTTCCCACGC TTGTCGCTGC GCGTACTGCG CTGCCCCCCG GAGAGGCTGG 
CCTTGCTTGG GGCGGCCCCG CCAGGCAGGC GCGGCCCTGC TCACGGCGAT GCTGACAGTC
GCGCTGGTGG CCAGCCTGGC GGCGGGGGCT TTGTGGCAGC AGTGGCGCAG CGTGGAGGTC
GAGGCCGCCG AGCGCGCGCG GGTGCAGTCG CTCTGGGTGC TGACGGGCGC GCTGGACTGG
GCGCGCCTGA TCCTGCGCGA GGATGGCCGC TCGGGCGGGG CCGACTACCT GTCCGAACCC
TGGGCCGTGC CGCTTGAAGA AGCCCGGCTA TCGACCTTTC TGGCGGCGGA CAAAACCAGC
GTCCCAGACG ACGACGCCAG CGCCTCGCAA ACCTTCTTAT CGGGACAGAT CACTGATCTG
CAGGCACGCC TGAACGTGAC CAGCCTGGTG GACAGCGCCA AGGTGTCGGA GCCTTCGCTG
AAAGCCTTTG CGAAACTCTT CGATCTGCTC AGCCTGCCCC GAGGCGAACT GGCGACGCTG
GCTGAAAATT TGCGCCTTGC GCTCAATACC GATCCCGAGA ACGAGGCCGA CCCGCTGGCG
CCCCTTTTGC CGCAGCGGGT TGATCAGCTG GTCTGGCTGG GCCTGTCGCC GGCCAGCCTG
GCCGTGCTGC GCCCCTACAT CACACTGCTC CCGGTACGCA CCCCGGTCAA TATCAATACC
GCCAGCGCCA CCGTGCTGTC CGCCTGCATC CCGTCGCTGG ACATGGCGCA GGCCCAGCGG
CTGGTGAACA TGCGCCAGGC CAACCACTTC CGGACACTGG CCGAAGTGAC CGCGCAACTC
GGCCAGACGG CCGTGCCGCT CAATGACGCG CAGCACAGCC TGAATTCACG TTTTTTCGAG
GTCCAGGGGC GGCTGCGGAT GGACCAGATC GTGGTGGAAG AGCATTCGGT GGTACAGCGC
GACGTGACTG ATGTGAAGAC CTTATGGCGT GACCGGGGCG CTTCGGCTCG GGAAATCCGC
ACTCTACAAT GA
 
Protein sequence
MSLSSHACRC AYCAAPRRGW PCLGRPRQAG AALLTAMLTV ALVASLAAGA LWQQWRSVEV 
EAAERARVQS LWVLTGALDW ARLILREDGR SGGADYLSEP WAVPLEEARL STFLAADKTS
VPDDDASASQ TFLSGQITDL QARLNVTSLV DSAKVSEPSL KAFAKLFDLL SLPRGELATL
AENLRLALNT DPENEADPLA PLLPQRVDQL VWLGLSPASL AVLRPYITLL PVRTPVNINT
ASATVLSACI PSLDMAQAQR LVNMRQANHF RTLAEVTAQL GQTAVPLNDA QHSLNSRFFE
VQGRLRMDQI VVEEHSVVQR DVTDVKTLWR DRGASAREIR TLQ