Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0529 |
Symbol | |
ID | 4687480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 558214 |
End bp | 559257 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639833525 |
Product | LysR family transcriptional regulator |
Protein accession | YP_980771 |
Protein GI | 121603442 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.438898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.151097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCGC GGTACGCTAT TCATGCTTTC AGCGCATTAA TCAGCCGACC TCTTCCTTCC ATCCCCATGC AGCATCCACA CCCCCATTTG CGTTCCCGGC CGATTGCCGC CGGGCAACTG CGCGCCTTCG AGGCGGTGGC CCGCCACCTC AATTTCCGCG CCGCCTCCGA AGAGCTGTCG CTGACCCAGT CGGCCGTCAG CAGGCAGATC CAGAGCCTGG AGGAAGACGT TGGCGTCAGC CTGTTTCTTC GCCACACGCG GGCTGTCGAA CTCACCAGCG CGGGCGCGCA GCTGCTGCGC GCCGTGCTGC CCTCGCTGGA GCGCATTGAT GGCGTGGTGC GCATGATCCG GCAAAGCGCC GGCCGCAAAA GCGTGGCCAT CAGCACCTGG GCGTCGTTTG CCTCGATGTG GCTGATTCCC CGGCTGGAGG CCTTTCAGCG CGAGCACCCC GACATCGACA TCCGCATTGA TGCGACCGAC ACCCCGGTGG ACCTGGAAAC CACCGACGTG GACCTGGCCC TGCGCTACAG CATGCCGGCC AGCGTGCCGG CGCAGGCGCG GCGCCTGTTC GGCGAGCAGC TCACGCCGGT CATCAGCCCC TGGCTGCTCA AGAGCGGCCC GCGCCTGCAA AATGCGCAGG ATCTGGCCCG GTTTGCGCTG GTCGAAGCCA GCGACGCGCA CCGCACCCAG CACATGGAAT GGCTGAGCTG GCAGCGCTGG TTTGACATGC AGGGCTTGCG GCGTTTCGAG CCCAAGCGCT GGCTGTATTT CAACTATGCC CACCAGATCG CCCAGGCGGC CCTGACCGGC CAGGGCGTGG CGCTGGCGCG CATGCCCTTG ATTGCCGAGA GCCTGGCCAG TGGCGACCTG GTCGAGGTCT TGCCGGACCG GCGCATGGAC TCGCCGATGG CTTACTGGCT GATCGTCGGG CCGCGCAATG CCGCACGGCC CGAGGTGCAG GCGTTTTGCA GCTGGATCGA AGCGCAGGCG GCACAGACGC GCGAGGCGAT TGGCGACGTT CCACCCGCTG CGCCAGCCAG ATAA
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Protein sequence | MKSRYAIHAF SALISRPLPS IPMQHPHPHL RSRPIAAGQL RAFEAVARHL NFRAASEELS LTQSAVSRQI QSLEEDVGVS LFLRHTRAVE LTSAGAQLLR AVLPSLERID GVVRMIRQSA GRKSVAISTW ASFASMWLIP RLEAFQREHP DIDIRIDATD TPVDLETTDV DLALRYSMPA SVPAQARRLF GEQLTPVISP WLLKSGPRLQ NAQDLARFAL VEASDAHRTQ HMEWLSWQRW FDMQGLRRFE PKRWLYFNYA HQIAQAALTG QGVALARMPL IAESLASGDL VEVLPDRRMD SPMAYWLIVG PRNAARPEVQ AFCSWIEAQA AQTREAIGDV PPAAPAR
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