Gene Pnap_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0402 
Symbol 
ID4686440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp400694 
End bp401629 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content69% 
IMG OID639833395 
Producthypothetical protein 
Protein accessionYP_980646 
Protein GI121603317 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.071134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC GCAGGGCGGA CATCACCCGG GGCCTGTGGC TGGGCCTGCT GGGCATCGTG 
GTTTTTGCGG TGACGCTGCC GATGACGCGC CTGGCCGTGG GCACCCCCGA GGCGCCGCAG
ATGTCAGGCC TCTTCATCGC GATGGGCCGG GCGCTGGTGG CCGCCGCGCT GTCGGCGGTG
TTCTTGGTCG CCACCCGCGC GCCGTGGCCC CGGCGGCAGG ATGTGCCGCC GCTGTTGCTG
ACCGCCGCCG GCGTGGTGCT GGGCTTTCCG CTGCTCACGT CCATCGCCAT GCGCCATGTC
GAGGCAGTGC ATGCGAGCGT GATCGTCGGC GTGTTGCCGC TGGCCACCGC AGCCGTCGGC
GCGCTGCTGC ATCGCCAGCG GCCGTCTGCC GGCTTTTGGC TGTGCGCCGG ACTGGGAAGT
GCGCTGGTGG TGGCATTTAC CATGTTGCGT TCCGGTGCAC CGGGCGGCGG CTTGTCGATC
CAGCTGGCCG ACCTGTTGCT GCTGGCCGCC ATGCTGTGCG CCGCCGTGGG CTATGGCTAC
GGTGCGCGGC TGTCGCAGCA CCTGCGCGCC GAGCATGTGA TTTGCTGGGC GCTGGTGATG
GCGCTGCCGC TGACCTTGCC GCTGTCGCTG GCCAACTGGC CGGCCACGCC GCTCAAGGCC
ACGGCCTGGT GGGGCTTTGC CTACCTGGCG GTGTTTTCGA TGTGGCTGGG ATTTTTTGCC
TGGTACCGCG GCCTGGCGCT GGGCGGCACG GTGCGCGTCA GCCAGGTGCA GCTGGTGCAG
CCCTTCTTGT CGATGCTGTT TGCCGTGCCG CTGCTGGGCG AACGGCTGGA CGCGGTGACA
GCCGGCTTTG GCCTGGCCGT GATTGGGGTG GTGTTCATCG GCAAGAAAAT GCCGGTCAAC
GCCCTTCCTT TGGCCAGCTT GCCGTCAAGG CCTTGA
 
Protein sequence
MTQRRADITR GLWLGLLGIV VFAVTLPMTR LAVGTPEAPQ MSGLFIAMGR ALVAAALSAV 
FLVATRAPWP RRQDVPPLLL TAAGVVLGFP LLTSIAMRHV EAVHASVIVG VLPLATAAVG
ALLHRQRPSA GFWLCAGLGS ALVVAFTMLR SGAPGGGLSI QLADLLLLAA MLCAAVGYGY
GARLSQHLRA EHVICWALVM ALPLTLPLSL ANWPATPLKA TAWWGFAYLA VFSMWLGFFA
WYRGLALGGT VRVSQVQLVQ PFLSMLFAVP LLGERLDAVT AGFGLAVIGV VFIGKKMPVN
ALPLASLPSR P