| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0246 |
|---|
| Symbol | |
|---|
| ID | 4689221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 250453 |
|---|
| End bp | 251364 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639833239 |
|---|
| Product | aminotransferase, class IV |
|---|
| Protein accession | YP_980492 |
|---|
| Protein GI | 121603163 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCCA CATCCATGAC CACGTCCGCC GCCAGCGCCC TGCCCGATAC GCCCTGCTAC
CTCAACGGCG ACTTCAGCAC GCTCAGGGAC GCCAAGATCA GCGTGCTCGA TCGCGGCTTC
ATCTTTGGCG ATGCCGTCTA TGAAGTTGTG CCCGCCTATG CCGGCAAGCT GTTCCGCTTC
GAGCAGCACA TGGCGCGCCT CGACCGCAGC CTGGCCGAGC TGCGCATCGC CAATCCGCTG
ACACACGCCC AGTGGCAGGG CATTACTCTT AAATTAATAG CTGACCATGC CCTCTCAACG
GGCACGGAGA CGCAAAAAGA CAATCAACTG ATCTATATCC AGGTGACGCG CGGCGTGGCC
ATGCGCGACC ACCCGATGCT GCCCGGCTTG ACGCCTACCG TGTTCATCAT GGTCAACCCG
ATGAAACTGC CCAGCGACCA GCAACGCGCG CAAGGCGTGG CCTGCGTCAG CGCCGGCGAT
TTCCGCTGGG AAAAGGCGCA TATCAAGAGC ACCAGCCTGC TGGGCGCGGT GTTCTCGCGC
CAGATCAGCG TGGACGCCGG CGCGCTGGAA ACCGTGATGT TTCGCGGCGA CCACCTCAGC
GAAGCGGCCG CCAGCAATGT CTGGGTCGTC AAGCACGGCA AGGTGATGGG GCCGCCCAGG
GACCACCTGG TGCTCGAAGG CATCCGCTAT GGACTGATCG AGGAAATCTG CCGCGCGGCC
GGGATTGATT TTGAGTTGTG CCGCATCAGC CGGGCCGAAG TGCTGGCCGC CGACGAGTTG
CTGCTGTCGT CGGCCACCAA GGAGATCCTG CCCATCACCC TGCTGGACGG CCAGCCCGTC
GGCAACGGCC AGCCCGGCCC GATTTATGCA AAACTGTACG CCGCCTACCA GCAAGCCAAA
GAGGAGTCAT AG
|
|---|
| Protein sequence | MQSTSMTTSA ASALPDTPCY LNGDFSTLRD AKISVLDRGF IFGDAVYEVV PAYAGKLFRF
EQHMARLDRS LAELRIANPL THAQWQGITL KLIADHALST GTETQKDNQL IYIQVTRGVA
MRDHPMLPGL TPTVFIMVNP MKLPSDQQRA QGVACVSAGD FRWEKAHIKS TSLLGAVFSR
QISVDAGALE TVMFRGDHLS EAAASNVWVV KHGKVMGPPR DHLVLEGIRY GLIEEICRAA
GIDFELCRIS RAEVLAADEL LLSSATKEIL PITLLDGQPV GNGQPGPIYA KLYAAYQQAK
EES
|
|---|
| |