| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0166 |
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| Symbol | |
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| ID | 4688847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 176615 |
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| End bp | 178423 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639833159 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_980412 |
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| Protein GI | 121603083 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.719682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTTC AACAACTCTA CTGGATTGCA ATGCCTCAAA ATTTGAAAGC AATCCTGAAA
ACGGATGGCT CACGATTCGC ACTGGGAACC GGCGTGCTTT ACGCGGTGCT TGGATTGTTG
TGGATCATTG CCTCGGATGC GGCTATTTCG TCCATTTCCA CCGACCCCGC ATGGCTGGTA
ACGGCACAGC GCTACAAGGG ATTTTTCTAT GTTGGGGTGA CCTCCGTGGG GCTGATTTTC
CTGGTCAACG CGGGCTACCG GCGGCTCTGG AATGCGCTCA GCCGTGCCGA GGCCACGGAA
CTGCAGATCG GGGATCTGTT CCTGCAGCAT CCCAAGCCCA TGTGGGTCTA TGACCGCGAC
ACCCTTGAAT TCATCGCCGT GAATGACGCG GCCACCCGCT ACTACGGGTA TTCGCGTGAG
GCGATGCTGG CGATGAACCT GGCCGATATC TGCCCGGAAG AGGACATCTC ACGCCTGCAT
GCGCTCATGC ACAGCCCGCA GGACCGGCAC CGCGACATCG GCGTGGTGCG GCACTGCAAG
CGCTCCGGTG AAGTGGTTTT TGTCCACCTG ACGGCGCATG CGGTCGAGTT CATGCAGCGC
AAGGCGGAAA TGGTGATGGC CATCGACGTC ACGGCCGATA TCCTGTCCAA GCATGCCCTT
GAACGCCAGG AAGCGCAGTT TCGGCAACTC CACCAAAGTC TGGCCAGCAT CCTGTGGATC
GCCTCGGCCG ACGGCCGGAC CATGCTCTAT GTCAGTCCGG CGCTGGAGCG CGTCTATGGT
TTTGCGCCCG AGGCGATGCA GGCCAATCCG GACCTTTGGC TCCAGGTCGT CCATCCCGAT
GATGCGCACA TTGCAAAAGC GTCCAGTGTT GAACTGATGA CCGAGGGCGA AGCGAGTTGC
GAGTACCGGA TTCGTGCCAC GTCGGGCGAG ATCAAATGGG TTTCGGACCG CAAGCGGCTC
ATCGTCGATG CCGAGGGGCT GGTGACGATG ATGGGCGGCA TTCTCGAAGA CATCACGGCT
GCCAAGGAAC ACGAGGCCCT GCGTGCCAGA ACGCATGTTG AACTCGAAAG GCTGGTCACC
GAGCGAACCG CTGAACTGGT GCGTGTCAAT GCCGAACTCG ACGCGTTTGC CAGGACCATC
GCCCACGATT TGAAGGCGCC GCTGGTGTCG GTGATCGGTT TCTCCCAGCT TCTTCAAAAC
CGCCATGCCG ATACGCTCAA GGAAGACGGT GTCCGGCTGA TTGCCCGGAT CGGGCGTTCG
GCCCGGCAAA TGGCCAGCCT GGTCAATGAC CTGCTGGCCC TGTCGCGCGT CTCCAAGACC
GTGCTGGTCA TCGAGGACAT CGACCTTGTT CCCCTGGCGC ATGAAATCAT CGAAGAGCTG
CGCGAGCAGG AGCCCCATCG CCAGGTCCGC TTCGAGTCGC CTGCATCGCT GCAGGTGCGC
GCAGACCCGG GCCTGGTGCG GCCGCTGCTG ACCAATCTGC TGGGCAACGC CTGGAAGTTC
ACGGGCAAGC GTGACGATGC CTGCGTTCAG CTACTGCTGG CGGGCGCGGC GCCTGAAGCG
ACTTTCTGCG TCAGGGACAA TGGCGTGGGC TTTGACGCCA GCAGCAGCGA ACTGCTGTTC
AAGCCCTTTC AGCGCTTTCA CACGCTGAGC GAATTCAGCG GAACCGGCAT CGGACTGACG
ACCTGCGAGC GAATCGTTGC CCGGCACCAT GGGCGCATCT GGCTCGAATC GACCGTGGGC
GAGGGCACAT CGGTCTTCGT CACCCTGGCC CCTCCCGCTC CCGATCTGCC GCATCTGGCG
CCAGCATGA
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| Protein sequence | MLFQQLYWIA MPQNLKAILK TDGSRFALGT GVLYAVLGLL WIIASDAAIS SISTDPAWLV
TAQRYKGFFY VGVTSVGLIF LVNAGYRRLW NALSRAEATE LQIGDLFLQH PKPMWVYDRD
TLEFIAVNDA ATRYYGYSRE AMLAMNLADI CPEEDISRLH ALMHSPQDRH RDIGVVRHCK
RSGEVVFVHL TAHAVEFMQR KAEMVMAIDV TADILSKHAL ERQEAQFRQL HQSLASILWI
ASADGRTMLY VSPALERVYG FAPEAMQANP DLWLQVVHPD DAHIAKASSV ELMTEGEASC
EYRIRATSGE IKWVSDRKRL IVDAEGLVTM MGGILEDITA AKEHEALRAR THVELERLVT
ERTAELVRVN AELDAFARTI AHDLKAPLVS VIGFSQLLQN RHADTLKEDG VRLIARIGRS
ARQMASLVND LLALSRVSKT VLVIEDIDLV PLAHEIIEEL REQEPHRQVR FESPASLQVR
ADPGLVRPLL TNLLGNAWKF TGKRDDACVQ LLLAGAAPEA TFCVRDNGVG FDASSSELLF
KPFQRFHTLS EFSGTGIGLT TCERIVARHH GRIWLESTVG EGTSVFVTLA PPAPDLPHLA
PA
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