Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0078 |
Symbol | |
ID | 4686441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 82107 |
End bp | 82568 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639833072 |
Product | putative transposase, IS891/IS1136/IS1341 |
Protein accession | YP_980325 |
Protein GI | 121602996 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.318478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACTT TGCGCGCCTA TCGATTCCAG CTTCGCTGCA AGCCAGAGCA AGAAAGAGCT TTGCGGCGCA GTGCAGGTTG TGCACGCTGG ATCTGGAACC AGGCGATCTC CGAGCAGCGC TGGCGCTATG CCGCTGGCGA AAAATACGCC GGCTACGCCG AGATGTGCAA ATGGCTGACG ACCTGGCGCA ACGCGCCTGA GACGATTTGG CTGTCAGAAG CACCCATTCC TCCGCAGCAG CAGGCGCTCA AGCGCCTGCA TGAGGCCTAC CAGCGCTTCT TTGCCAAGGC TGGGGGCTAT CCGAGCTTCA AGCGCCACGG CGAGGAGCCC GGCCTGCGAT TTCCCGCTGC GGCGCACTTT CAGATCGACC AGCCCAACCA GCGCATCAAG GTCATGAAGC TGGGCTGGCT GCGCATCAAG CAGAGCCAGG GGATCAACGG AACGCCCAGA ACCTCTCGCT GA
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Protein sequence | MSTLRAYRFQ LRCKPEQERA LRRSAGCARW IWNQAISEQR WRYAAGEKYA GYAEMCKWLT TWRNAPETIW LSEAPIPPQQ QALKRLHEAY QRFFAKAGGY PSFKRHGEEP GLRFPAAAHF QIDQPNQRIK VMKLGWLRIK QSQGINGTPR TSR
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