Gene Pnap_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0078 
Symbol 
ID4686441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp82107 
End bp82568 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content62% 
IMG OID639833072 
Productputative transposase, IS891/IS1136/IS1341 
Protein accessionYP_980325 
Protein GI121602996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.318478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTT TGCGCGCCTA TCGATTCCAG CTTCGCTGCA AGCCAGAGCA AGAAAGAGCT 
TTGCGGCGCA GTGCAGGTTG TGCACGCTGG ATCTGGAACC AGGCGATCTC CGAGCAGCGC
TGGCGCTATG CCGCTGGCGA AAAATACGCC GGCTACGCCG AGATGTGCAA ATGGCTGACG
ACCTGGCGCA ACGCGCCTGA GACGATTTGG CTGTCAGAAG CACCCATTCC TCCGCAGCAG
CAGGCGCTCA AGCGCCTGCA TGAGGCCTAC CAGCGCTTCT TTGCCAAGGC TGGGGGCTAT
CCGAGCTTCA AGCGCCACGG CGAGGAGCCC GGCCTGCGAT TTCCCGCTGC GGCGCACTTT
CAGATCGACC AGCCCAACCA GCGCATCAAG GTCATGAAGC TGGGCTGGCT GCGCATCAAG
CAGAGCCAGG GGATCAACGG AACGCCCAGA ACCTCTCGCT GA
 
Protein sequence
MSTLRAYRFQ LRCKPEQERA LRRSAGCARW IWNQAISEQR WRYAAGEKYA GYAEMCKWLT 
TWRNAPETIW LSEAPIPPQQ QALKRLHEAY QRFFAKAGGY PSFKRHGEEP GLRFPAAAHF
QIDQPNQRIK VMKLGWLRIK QSQGINGTPR TSR