| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1404 |
|---|
| Symbol | |
|---|
| ID | 5757470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1509519 |
|---|
| End bp | 1510214 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641302596 |
|---|
| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
|---|
| Protein accession | YP_001568430 |
|---|
| Protein GI | 160902849 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACA AAATTAATGA AGAACAACTG GTAATGGAGT TTTTGCCAAA AATAAAGATT
ATAGCTTTGA ATCTGAAAAC CACTTTACCA AAAAATATAG AATTAGAGGA TTTGATTCAG
GAGGGGATTA TTGGATTACT TCAATCATAT AAAAGATACA ACCCGGAAAA AGGTACTTCC
TTTTACACCT ACGCTCTAAA AAGGATAAAA GGTTCAATGT ATGATTATCT GAGGAGAATA
GATTGGCTTC CAAAGGACGT TCGAAGTTTA GTAAAAAAGT ACGAAGATTT GATTTACGAA
TGTAAAGATA ATGAGTACAT AGACGATAAT TCAGTGGCAG AAAAACTTCA TATTGAAAAA
AATGATGTAG ATAAAATAAA GTTCTCCTTG AGCAAAAGGC AGATTCTTCA ATTGGATGAG
TACTTTTTAA ACAATGAAGA AGATACCTGG CTTGAAGATA TACAAGAAGA AAACGACCCT
GAAATACTGG CTTATAAAGA TATGTTACAT GATAAATTAA CAGAAAGTAT CGAGAAATTG
GAAGAAAGAG AAAAATTGAT ACTTTCTCTA TACTATAACG AAGGCTTAAC CTTTAAAGAA
ATAGGAAGTG TTTTAGAAAT AAGTGAATCA CGGGTTTCCC AGTTACACTC AGTAATATTG
GTGAAATTAA AAAAGATGAT TCAAGGAAGT GAATAA
|
|---|
| Protein sequence | MKYKINEEQL VMEFLPKIKI IALNLKTTLP KNIELEDLIQ EGIIGLLQSY KRYNPEKGTS
FYTYALKRIK GSMYDYLRRI DWLPKDVRSL VKKYEDLIYE CKDNEYIDDN SVAEKLHIEK
NDVDKIKFSL SKRQILQLDE YFLNNEEDTW LEDIQEENDP EILAYKDMLH DKLTESIEKL
EEREKLILSL YYNEGLTFKE IGSVLEISES RVSQLHSVIL VKLKKMIQGS E
|
|---|
| |