| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1377 |
|---|
| Symbol | |
|---|
| ID | 5757954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1483280 |
|---|
| End bp | 1484641 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641302570 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001568404 |
|---|
| Protein GI | 160902823 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTAAAAG CGGAATACGC CATCATTTTT TATGTTTTAT TGATCGTCTT ATCCTTGCTT
TTAGTCAGAA TGTTTTCGAA AAGATATTTA AAACCTGTTA AGTACAGGAA AGTTAAAGAA
AGCATTTCAG CTTATTTGTA TCTATTACCT TCTTTTGTGA TTCTAGGGAT ATTTGTTTTT
TGGCCTATTT TTTATTCTTT CTATCTGAGT TTTTTTAAGT GGGATTTCCA AAATCAAGGT
AATCCAATTT TCATTGGGTT TCAGAATTAT ATAGAATTAT TTAAGTTAAA TCAACCTGTG
AATATAACAT TCAACGAAGC ATTTTTCAAT ACACTTCTAA TCTTTATGAC CGCTATTTTT
ATTATTCATT TGATCTTTGA CCTAAAAAAG ATAAAAACTC CTAGGCAAAA ATATTTAATT
GTCTGTATGA GTATATTGGG AATAATTTCT TTGTTAACTA TTAATTCAAT ACAGTATCTT
AATGTAGTGA GCGCCTTAGT TCTCGTTGTG GTATACACGA TTTTATTATC TTTACACTTT
GCCGATCAAA TGTCCAATAA AATTTTTCTT CGAATAATCA CGTTCATCGG ATTATGGATA
GCCTTTTACT CGTTGGGAGT CCCCGAAATT ATAAGGTTTT TGAGCTTAGC AAAGGAACAG
TCGTTGTTCA TCAAAGCAAT ATGGAATACG ACTTATTATG TTCTACTTTC CACGCCTATT
ACTATTCTGT TTGCTTTGTT AATAGCCTTA TTGTTGAATA GAAAATTATA TGGCAAGACT
TTTTTTAGAA CGGTTTATTT TATTCCTTTT GTAACAAGTG TAGTGGCAAT TTCTCTAGTT
TGGCAATGGA TTTTCAACGA CAATGGTTTA TTAAATTATA TTTTAACTCA AATAGGTTTT
TCAAAAACTC CATGGCTTAA AGATCAGAAG TTTACGATTC CTACTGTTGC TATAATTTCT
ATATGGAAAA TGGTAGGCTA TTACGCGATC ATCTTTTTGG CAGGCCTGCA AAATATTGAT
AAAGCTTACT ACGAAGCTGC TGAAGTTGAT GGAGCCACGC CTTTTCAAAA ATTTCAGTTT
ATTACCTTAC CTTTATTATC TCCCACAACT TACTTTGTAA TCATAGTTGC TATGATCGGG
GCATTTAAAG TCTTCGATGA GATTTTCATA CTCTATGTAG GTATGCCTGG ACCTTACAAC
AACAGTGGGA TGACAATGGT TTACTATGTG TATGATATGT TCTACGTTCA ACAAAGGATG
GGAAGAGCTA GTGCTGCTGC TTACGTACTT TTTGGGATTA TTCTATTGTT TACAATCCTT
CAGATGAGAA GTAGCAGAAG TAGAATACAT TATGAATCCT AA
|
|---|
| Protein sequence | MLKAEYAIIF YVLLIVLSLL LVRMFSKRYL KPVKYRKVKE SISAYLYLLP SFVILGIFVF
WPIFYSFYLS FFKWDFQNQG NPIFIGFQNY IELFKLNQPV NITFNEAFFN TLLIFMTAIF
IIHLIFDLKK IKTPRQKYLI VCMSILGIIS LLTINSIQYL NVVSALVLVV VYTILLSLHF
ADQMSNKIFL RIITFIGLWI AFYSLGVPEI IRFLSLAKEQ SLFIKAIWNT TYYVLLSTPI
TILFALLIAL LLNRKLYGKT FFRTVYFIPF VTSVVAISLV WQWIFNDNGL LNYILTQIGF
SKTPWLKDQK FTIPTVAIIS IWKMVGYYAI IFLAGLQNID KAYYEAAEVD GATPFQKFQF
ITLPLLSPTT YFVIIVAMIG AFKVFDEIFI LYVGMPGPYN NSGMTMVYYV YDMFYVQQRM
GRASAAAYVL FGIILLFTIL QMRSSRSRIH YES
|
|---|
| |