Gene Pmob_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1249 
Symbol 
ID5756573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand+ 
Start bp1337694 
End bp1338263 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content31% 
IMG OID641302453 
Productputative transcriptional regulator 
Protein accessionYP_001568288 
Protein GI160902707 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.629566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTTT ATTTATGTTA CTTTTTTGCA TTTTTGAGAA AGTTAAGCAG ACACTTTTTG 
GTAGAGAATC GCATAAATTA TTCTTTTAAA TTTAATGCCA TCGAACTTAA TAACTTATCA 
CCTCGTTTAA AAGGTAGTGC ACTTCGAAAT GAATTGTTGG CAGATGTATT TTTCAAAGCT 
GGATTAATAG AGGCCTGGGG TAGAGGAACC ATAAAAATTA TTGATGAATG TAAAAAAGCA 
GGATTACCGG AACCAGAATT TAAAGAGGAG TTTGGCGGTT TTGCAGTTTA TTTCTATAAA 
GACATTTATA CAGAAGATAA TTTAAGAAAA ATTGGGTTAA ATGAAAGGCA AATCAAGGCA 
GTAAAGTATG TAAAAGAAAA GGGAAAGATT ACTAATAAGG AATATCAAGA GTTAAATAAA 
ACATCAAAAC CAACAGCGAC AAGGGATCTT CGCAATCTTG TTGATAAAGG AATAGTTATA 
ATGCAAGGGG AAGCTAAAAG AGAAATATAT TATCAATTGA GCCAAAAAAG AGCCAATAAT 
GAGCCAATTG AGCCAAAAAA GAGCCAATAA
 
Protein sequence
MIFYLCYFFA FLRKLSRHFL VENRINYSFK FNAIELNNLS PRLKGSALRN ELLADVFFKA 
GLIEAWGRGT IKIIDECKKA GLPEPEFKEE FGGFAVYFYK DIYTEDNLRK IGLNERQIKA 
VKYVKEKGKI TNKEYQELNK TSKPTATRDL RNLVDKGIVI MQGEAKREIY YQLSQKRANN 
EPIEPKKSQ