Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_1171 |
Symbol | |
ID | 5756604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | + |
Start bp | 1256316 |
End bp | 1257428 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641302377 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_001568212 |
Protein GI | 160902631 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00934789 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTTG AAATAGATAC AAGGGTTTTA AAAAATGCTG TTCAATTAAC CAGTAATGCT GTTTCAAGAA AAACAGCTAA CCCTATTTTG AAAGGAATAA AATTGGCTGT AGAAGACGAT GAGTTACACA TTTATGCTAC AGATTTGCAG ACCGGTTTTC ACAAATGGCT GAAGGTTAAA GATAGTGATG AAAACTTTTC TACAGTGGTG GAACAGACGA TATTCTTGGA AATTCTATCG AATCTCACTT CTGACACAAT TACGATCACT TTGGATGGAG TCTTGAAGAT TTCAGGTGGC AATTCTGTAT TTCGATTACC TACCATGGAC CCTGATGAAT TTCCTTCTCT TGCTTTCGAG GTTACAGGGA ATTCAATTTT GTTAGATAGA ACAATTATTA CTAATATGAT CGATAAGGTT GTTTTTTGTG CTTTAAAAGA TTCTTCTTCC CTTTCGCGCA ATTTAAATGC CGTTTACTGG GATTTTAGAC AAGGTGGCTT TTTGAACTTA GTCGCAACCG ATTCATATAG ATTAGCCCTT TCTGAAAGTA AGTTGGAAGA TGATAATATT CTTTCACCAT TCCTTTTATC CCTAAAAAGT ATGGATGAAT TAAAAACGAT ACTTTCTTCC GCAAAAACGG AGAAGGTAAG AGTGGTCCAA AGTGGTTCTC AAATTCTCTT TGATTTTGAA GAAGATAATA ACCAGCTGAT TTATAACGTT ATAGATGCTG AATTTCCTAA TTATTTGAGT ATAATTCCCG AGAGTTTTAT CACAAAGATC AAGGCTAAGA CCTCAGAATT TTTGGCTATT ATGAAAAGGA TGTCTATAAC AGCCGGAAGT GAGGAATATA CTTTATTAAA TATTGAAGAT GGAAGAATAC AGTTTTATGC GAGTTCTCCG GATGTTGGTG AAGCAAAAGA AGAGATTGAT GTCGAACAAG AGGGTAAAAA TATTGAGATT GCTTATTCCC CAAGATATTT CAGGGAAGCG TTAGAAAGAA TAGAGACAGT GGAATTTGAA TTTGATATAT CCGATGAGGA AAAACCTACC ATTTTAAAAC CTTTGGAAGA CAACAGTTAC ATGTTCATAA TAATGCCAAA AAGGAAAAGT TGA
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Protein sequence | MSFEIDTRVL KNAVQLTSNA VSRKTANPIL KGIKLAVEDD ELHIYATDLQ TGFHKWLKVK DSDENFSTVV EQTIFLEILS NLTSDTITIT LDGVLKISGG NSVFRLPTMD PDEFPSLAFE VTGNSILLDR TIITNMIDKV VFCALKDSSS LSRNLNAVYW DFRQGGFLNL VATDSYRLAL SESKLEDDNI LSPFLLSLKS MDELKTILSS AKTEKVRVVQ SGSQILFDFE EDNNQLIYNV IDAEFPNYLS IIPESFITKI KAKTSEFLAI MKRMSITAGS EEYTLLNIED GRIQFYASSP DVGEAKEEID VEQEGKNIEI AYSPRYFREA LERIETVEFE FDISDEEKPT ILKPLEDNSY MFIIMPKRKS
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